haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations]
We developed haploR, an R package for querying web based genome annotation tools HaploReg and RegulomeDB. haploR gathers information in a data frame which is suitable for downstream bioinformatic analyses. This will facilitate post-genome wide association studies streamline analysis for rapid discov...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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F1000 Research Ltd
2017-05-01
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| Series: | F1000Research |
| Subjects: | |
| Online Access: | https://f1000research.com/articles/6-97/v2 |
| _version_ | 1818134201333972992 |
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| author | Ilya Y. Zhbannikov Konstantin Arbeev Svetlana Ukraintseva Anatoliy I. Yashin |
| author_facet | Ilya Y. Zhbannikov Konstantin Arbeev Svetlana Ukraintseva Anatoliy I. Yashin |
| author_sort | Ilya Y. Zhbannikov |
| collection | DOAJ |
| description | We developed haploR, an R package for querying web based genome annotation tools HaploReg and RegulomeDB. haploR gathers information in a data frame which is suitable for downstream bioinformatic analyses. This will facilitate post-genome wide association studies streamline analysis for rapid discovery and interpretation of genetic associations. |
| first_indexed | 2024-12-11T09:04:51Z |
| format | Article |
| id | doaj.art-dd9e5bf8fcfe4a48a331f1980744c68c |
| institution | Directory Open Access Journal |
| issn | 2046-1402 |
| language | English |
| last_indexed | 2024-12-11T09:04:51Z |
| publishDate | 2017-05-01 |
| publisher | F1000 Research Ltd |
| record_format | Article |
| series | F1000Research |
| spelling | doaj.art-dd9e5bf8fcfe4a48a331f1980744c68c2022-12-22T01:13:40ZengF1000 Research LtdF1000Research2046-14022017-05-01610.12688/f1000research.10742.212496haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations]Ilya Y. Zhbannikov0Konstantin Arbeev1Svetlana Ukraintseva2Anatoliy I. Yashin3Biodemography of Aging Research Unit (BARU) at Social Science Research Institute, Duke University, Durham, NC, USABiodemography of Aging Research Unit (BARU) at Social Science Research Institute, Duke University, Durham, NC, USADuke Population Research Institute, Duke University, Durham, NC, USABiodemography of Aging Research Unit (BARU) at Social Science Research Institute, Duke University, Durham, NC, USAWe developed haploR, an R package for querying web based genome annotation tools HaploReg and RegulomeDB. haploR gathers information in a data frame which is suitable for downstream bioinformatic analyses. This will facilitate post-genome wide association studies streamline analysis for rapid discovery and interpretation of genetic associations.https://f1000research.com/articles/6-97/v2Bioinformatics |
| spellingShingle | Ilya Y. Zhbannikov Konstantin Arbeev Svetlana Ukraintseva Anatoliy I. Yashin haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations] F1000Research Bioinformatics |
| title | haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations] |
| title_full | haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations] |
| title_fullStr | haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations] |
| title_full_unstemmed | haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations] |
| title_short | haploR: an R package for querying web-based annotation tools [version 2; referees: 2 approved, 1 approved with reservations] |
| title_sort | haplor an r package for querying web based annotation tools version 2 referees 2 approved 1 approved with reservations |
| topic | Bioinformatics |
| url | https://f1000research.com/articles/6-97/v2 |
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