Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa
MicroRNAs (miRNAs) play a critical role in post-transcriptional gene regulation that down-regulates target genes by mRNA degradation or translational repression. Evidence is increasing for their crucial roles during plant development. Identification of miRNAs at the global genome-level by high-throu...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2014-12-01
|
| Series: | Genomics Data |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2213596014000816 |
| _version_ | 1819179419112046592 |
|---|---|
| author | Wenna Fan Pengfei Shi Chengzhang Wang |
| author_facet | Wenna Fan Pengfei Shi Chengzhang Wang |
| author_sort | Wenna Fan |
| collection | DOAJ |
| description | MicroRNAs (miRNAs) play a critical role in post-transcriptional gene regulation that down-regulates target genes by mRNA degradation or translational repression. Evidence is increasing for their crucial roles during plant development. Identification of miRNAs at the global genome-level by high-throughput sequencing is essential to functionally characterize miRNAs in plants. Alfalfa (Medicago sativa L.) is one of the most widely cultivated perennial forage legumes worldwide. Fall dormancy is an adaptive character related to the biomass production and winter survival in alfalfa. However, little is known about miRNA-mediated developmental regulation of fall dormancy in alfalfa. Here, we provide detailed experimental methods and analysis pipeline in our study to identify miRNAs that were responsive to fall dormancy (Fan W et al., Genome-wide identification of different dormant Medicago sativa L. microRNAs in response to fall dormancy, submitted for publication) for reproducible research. The data generated in our work provide meaningful information for understanding the roles of miRNAs in response to seasonal change and growth regulation in alfalfa. |
| first_indexed | 2024-12-22T21:58:08Z |
| format | Article |
| id | doaj.art-ddbe74835e8b4a1bb85822863b8c4e08 |
| institution | Directory Open Access Journal |
| issn | 2213-5960 |
| language | English |
| last_indexed | 2024-12-22T21:58:08Z |
| publishDate | 2014-12-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Genomics Data |
| spelling | doaj.art-ddbe74835e8b4a1bb85822863b8c4e082022-12-21T18:11:13ZengElsevierGenomics Data2213-59602014-12-012C30530710.1016/j.gdata.2014.09.007Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfaWenna FanPengfei ShiChengzhang WangMicroRNAs (miRNAs) play a critical role in post-transcriptional gene regulation that down-regulates target genes by mRNA degradation or translational repression. Evidence is increasing for their crucial roles during plant development. Identification of miRNAs at the global genome-level by high-throughput sequencing is essential to functionally characterize miRNAs in plants. Alfalfa (Medicago sativa L.) is one of the most widely cultivated perennial forage legumes worldwide. Fall dormancy is an adaptive character related to the biomass production and winter survival in alfalfa. However, little is known about miRNA-mediated developmental regulation of fall dormancy in alfalfa. Here, we provide detailed experimental methods and analysis pipeline in our study to identify miRNAs that were responsive to fall dormancy (Fan W et al., Genome-wide identification of different dormant Medicago sativa L. microRNAs in response to fall dormancy, submitted for publication) for reproducible research. The data generated in our work provide meaningful information for understanding the roles of miRNAs in response to seasonal change and growth regulation in alfalfa.http://www.sciencedirect.com/science/article/pii/S2213596014000816Deep sequencingMicroRNAFall dormancyAlfalfa |
| spellingShingle | Wenna Fan Pengfei Shi Chengzhang Wang Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa Genomics Data Deep sequencing MicroRNA Fall dormancy Alfalfa |
| title | Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa |
| title_full | Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa |
| title_fullStr | Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa |
| title_full_unstemmed | Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa |
| title_short | Deep sequencing of the microRNA expression in fall dormant and non-dormant alfalfa |
| title_sort | deep sequencing of the microrna expression in fall dormant and non dormant alfalfa |
| topic | Deep sequencing MicroRNA Fall dormancy Alfalfa |
| url | http://www.sciencedirect.com/science/article/pii/S2213596014000816 |
| work_keys_str_mv | AT wennafan deepsequencingofthemicrornaexpressioninfalldormantandnondormantalfalfa AT pengfeishi deepsequencingofthemicrornaexpressioninfalldormantandnondormantalfalfa AT chengzhangwang deepsequencingofthemicrornaexpressioninfalldormantandnondormantalfalfa |