Two sequence- and two structure-based ML models have learned different aspects of protein biochemistry

Abstract Deep learning models are seeing increased use as methods to predict mutational effects or allowed mutations in proteins. The models commonly used for these purposes include large language models (LLMs) and 3D Convolutional Neural Networks (CNNs). These two model types have very different ar...

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Bibliographic Details
Main Authors: Anastasiya V. Kulikova, Daniel J. Diaz, Tianlong Chen, T. Jeffrey Cole, Andrew D. Ellington, Claus O. Wilke
Format: Article
Language:English
Published: Nature Portfolio 2023-08-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-023-40247-w

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