Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India
The mitogenome (17,388 bp) of the Nicobar shrew, Crocidura nicobarica was determined in the present study. The mitogenome comprises 13 PCGs (11,427 bp), 22 tRNAs (1507 bp), two rRNAs (2538 bp), and a major non-coding control region (1932 bp). The Maximum Likelihood phylogeny clearly discriminates al...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1999188 |
| _version_ | 1827772334365212672 |
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| author | Shantanu Kundu Manokaran Kamalakannan Kaomud Tyagi Vikas Kumar |
| author_facet | Shantanu Kundu Manokaran Kamalakannan Kaomud Tyagi Vikas Kumar |
| author_sort | Shantanu Kundu |
| collection | DOAJ |
| description | The mitogenome (17,388 bp) of the Nicobar shrew, Crocidura nicobarica was determined in the present study. The mitogenome comprises 13 PCGs (11,427 bp), 22 tRNAs (1507 bp), two rRNAs (2538 bp), and a major non-coding control region (1932 bp). The Maximum Likelihood phylogeny clearly discriminates all the studied Crocidura species with high bootstrap support by concatenated PCGs. The studied species, C. nicobarica shows a close relationship with Crocidura orientalis, distributed in Java, Indonesia. The lineage diversification and zoogeographic patterns are congruent in the present analyses and encouraged further sampling and more molecular data to elucidate their in-depth evolutionary relationship. |
| first_indexed | 2024-03-11T13:06:58Z |
| format | Article |
| id | doaj.art-dedb36fcfa4741d992e8cafbe3566ea5 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:06:58Z |
| publishDate | 2021-12-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-dedb36fcfa4741d992e8cafbe3566ea52023-11-03T14:36:00ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-12-016123418342210.1080/23802359.2021.19991881999188Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, IndiaShantanu Kundu0Manokaran Kamalakannan1Kaomud Tyagi2Vikas Kumar3Molecular Systematics Division, Centre for DNA Taxonomy, Zoological Survey of IndiaMammal and Osteology Section, Zoological Survey of IndiaMolecular Systematics Division, Centre for DNA Taxonomy, Zoological Survey of IndiaMolecular Systematics Division, Centre for DNA Taxonomy, Zoological Survey of IndiaThe mitogenome (17,388 bp) of the Nicobar shrew, Crocidura nicobarica was determined in the present study. The mitogenome comprises 13 PCGs (11,427 bp), 22 tRNAs (1507 bp), two rRNAs (2538 bp), and a major non-coding control region (1932 bp). The Maximum Likelihood phylogeny clearly discriminates all the studied Crocidura species with high bootstrap support by concatenated PCGs. The studied species, C. nicobarica shows a close relationship with Crocidura orientalis, distributed in Java, Indonesia. The lineage diversification and zoogeographic patterns are congruent in the present analyses and encouraged further sampling and more molecular data to elucidate their in-depth evolutionary relationship.http://dx.doi.org/10.1080/23802359.2021.1999188shrewan archipelagoendemic speciesmitogenomephylogeny |
| spellingShingle | Shantanu Kundu Manokaran Kamalakannan Kaomud Tyagi Vikas Kumar Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India Mitochondrial DNA. Part B. Resources shrew an archipelago endemic species mitogenome phylogeny |
| title | Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India |
| title_full | Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India |
| title_fullStr | Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India |
| title_full_unstemmed | Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India |
| title_short | Complete mitochondrial genome of critically endangered Crocidura nicobarica (Soricidae: Eulipotyphla) from the Great Nicobar Island, India |
| title_sort | complete mitochondrial genome of critically endangered crocidura nicobarica soricidae eulipotyphla from the great nicobar island india |
| topic | shrew an archipelago endemic species mitogenome phylogeny |
| url | http://dx.doi.org/10.1080/23802359.2021.1999188 |
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