CRISPRbuilder-TB: "CRISPR-builder for tuberculosis". Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA.
Mycobacterium tuberculosis complex (MTC) CRISPR locus diversity has long been studied solely investigating the presence/absence of a known set of spacers. Unveiling the genetic mechanisms of its evolution requires a more exhaustive reconstruction in a large amount of representative strains. In this...
Main Authors: | Christophe Guyeux, Christophe Sola, Camille Noûs, Guislaine Refrégier |
---|---|
Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2021-03-01
|
Series: | PLoS Computational Biology |
Online Access: | https://doi.org/10.1371/journal.pcbi.1008500 |
Similar Items
-
Unexpected diversity of CRISPR unveils some evolutionary patterns of repeated sequences in Mycobacterium tuberculosis
by: Guislaine Refrégier, et al.
Published: (2020-11-01) -
The future of CRISPR in Mycobacterium tuberculosis infection
by: Rima Zein-Eddine, et al.
Published: (2023-05-01) -
Investigating the Diversity of Tuberculosis Spoligotypes with Dimensionality Reduction and Graph Theory
by: Gaetan Senelle, et al.
Published: (2022-12-01) -
Comparison of in silico predicted Mycobacterium tuberculosis spoligotypes and lineages from whole genome sequencing data
by: Gary Napier, et al.
Published: (2023-07-01) -
Genomics and Machine Learning for Taxonomy Consensus: The Mycobacterium tuberculosis Complex Paradigm.
by: Jérôme Azé, et al.
Published: (2015-01-01)