MP3: Medical Software for Processing Multi-Parametric Images Pipelines

This article presents an open source software able to convert, display, and process medical images. It differentiates itself from the existing software by its ability to design complex processing pipelines and to wisely execute them on a large databases. An MP3 pipeline can contain unlimited homemad...

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Main Authors: Clément Brossard, Olivier Montigon, Fabien Boux, Aurélien Delphin, Thomas Christen, Emmanuel L. Barbier, Benjamin Lemasson
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-11-01
Series:Frontiers in Neuroinformatics
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fninf.2020.594799/full
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author Clément Brossard
Clément Brossard
Olivier Montigon
Fabien Boux
Fabien Boux
Aurélien Delphin
Thomas Christen
Emmanuel L. Barbier
Benjamin Lemasson
Benjamin Lemasson
author_facet Clément Brossard
Clément Brossard
Olivier Montigon
Fabien Boux
Fabien Boux
Aurélien Delphin
Thomas Christen
Emmanuel L. Barbier
Benjamin Lemasson
Benjamin Lemasson
author_sort Clément Brossard
collection DOAJ
description This article presents an open source software able to convert, display, and process medical images. It differentiates itself from the existing software by its ability to design complex processing pipelines and to wisely execute them on a large databases. An MP3 pipeline can contain unlimited homemade or ready-made processes and can be carried out with a parallel execution system. As a viewer, MP3 allows display of up to four images together and to draw Regions Of Interest (ROI). Two applications showing the strengths of the software are presented as examples: a preclinical study involving Magnetic Resonance Imaging (MRI) data and a clinical one involving Computed Tomography (CT) images. MP3 is downloadable at https://github.com/nifm-gin/MP3.
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spelling doaj.art-dfb602481e1e4bc684d95b7b27cf4c232022-12-22T00:57:00ZengFrontiers Media S.A.Frontiers in Neuroinformatics1662-51962020-11-011410.3389/fninf.2020.594799594799MP3: Medical Software for Processing Multi-Parametric Images PipelinesClément Brossard0Clément Brossard1Olivier Montigon2Fabien Boux3Fabien Boux4Aurélien Delphin5Thomas Christen6Emmanuel L. Barbier7Benjamin Lemasson8Benjamin Lemasson9University of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceMoGlimaging Network, HTE Program of the French Cancer Plan, Toulouse, FranceUniversity of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceUniversity of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceUniversity of Grenoble Alpes, Inria, CNRS, G-INP, Grenoble, FranceUniversity of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceUniversity of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceUniversity of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceUniversity of Grenoble Alpes, INSERM, U1216, Grenoble Institut des Neurosciences (GIN), Grenoble, FranceMoGlimaging Network, HTE Program of the French Cancer Plan, Toulouse, FranceThis article presents an open source software able to convert, display, and process medical images. It differentiates itself from the existing software by its ability to design complex processing pipelines and to wisely execute them on a large databases. An MP3 pipeline can contain unlimited homemade or ready-made processes and can be carried out with a parallel execution system. As a viewer, MP3 allows display of up to four images together and to draw Regions Of Interest (ROI). Two applications showing the strengths of the software are presented as examples: a preclinical study involving Magnetic Resonance Imaging (MRI) data and a clinical one involving Computed Tomography (CT) images. MP3 is downloadable at https://github.com/nifm-gin/MP3.https://www.frontiersin.org/articles/10.3389/fninf.2020.594799/fullsoftwaremedical imagesimage processingpipelinesdatabaseMRI
spellingShingle Clément Brossard
Clément Brossard
Olivier Montigon
Fabien Boux
Fabien Boux
Aurélien Delphin
Thomas Christen
Emmanuel L. Barbier
Benjamin Lemasson
Benjamin Lemasson
MP3: Medical Software for Processing Multi-Parametric Images Pipelines
Frontiers in Neuroinformatics
software
medical images
image processing
pipelines
database
MRI
title MP3: Medical Software for Processing Multi-Parametric Images Pipelines
title_full MP3: Medical Software for Processing Multi-Parametric Images Pipelines
title_fullStr MP3: Medical Software for Processing Multi-Parametric Images Pipelines
title_full_unstemmed MP3: Medical Software for Processing Multi-Parametric Images Pipelines
title_short MP3: Medical Software for Processing Multi-Parametric Images Pipelines
title_sort mp3 medical software for processing multi parametric images pipelines
topic software
medical images
image processing
pipelines
database
MRI
url https://www.frontiersin.org/articles/10.3389/fninf.2020.594799/full
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AT oliviermontigon mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT fabienboux mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT fabienboux mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT aureliendelphin mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT thomaschristen mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT emmanuellbarbier mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT benjaminlemasson mp3medicalsoftwareforprocessingmultiparametricimagespipelines
AT benjaminlemasson mp3medicalsoftwareforprocessingmultiparametricimagespipelines