Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis
The complete mitochondrial genome of Lysmata amboinensis was obtained and described in this study. This complete mitochondrial genome is 16,735 bp in length and consists of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 22 transfer RNA genes (tRNA). A total of 23 genes were encode...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-10-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1842262 |
| _version_ | 1797639036418916352 |
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| author | Yan Wang Ling Zeng Jing Wen Xuyan Li Yafen Huang Yulin Sun Juan Zhao |
| author_facet | Yan Wang Ling Zeng Jing Wen Xuyan Li Yafen Huang Yulin Sun Juan Zhao |
| author_sort | Yan Wang |
| collection | DOAJ |
| description | The complete mitochondrial genome of Lysmata amboinensis was obtained and described in this study. This complete mitochondrial genome is 16,735 bp in length and consists of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 22 transfer RNA genes (tRNA). A total of 23 genes were encoded by the heavy strand. The overall base composition of the heavy-strand was 31.68% A, 14.31% G, 21.65% C, and 32.36% T, with a high A + T content of 64.05%. The phylogenetic analysis suggested that hippolytidae shrimp may be considered as the polyphyletic taxon. These results are useful for understanding the phylogenetic relationships and evolution of Hippolytidae shrimp. |
| first_indexed | 2024-03-11T13:12:05Z |
| format | Article |
| id | doaj.art-dff28b2224d64f0682e11619fbc96ccb |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:05Z |
| publishDate | 2020-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-dff28b2224d64f0682e11619fbc96ccb2023-11-03T14:08:17ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-10-01543851385310.1080/23802359.2020.18422621842262Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysisYan Wang0Ling Zeng1Jing Wen2Xuyan Li3Yafen Huang4Yulin Sun5Juan Zhao6Department of Scientific Research, Lingnan Normal UniversityDepartment of Chemistry, Lingnan Normal UniversityDepartment of Biology, Lingnan Normal UniversityDepartment of Biology, Lingnan Normal UniversityDepartment of Biology, Lingnan Normal UniversityDepartment of Biology, Lingnan Normal UniversityDepartment of Biology, Lingnan Normal UniversityThe complete mitochondrial genome of Lysmata amboinensis was obtained and described in this study. This complete mitochondrial genome is 16,735 bp in length and consists of 13 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 22 transfer RNA genes (tRNA). A total of 23 genes were encoded by the heavy strand. The overall base composition of the heavy-strand was 31.68% A, 14.31% G, 21.65% C, and 32.36% T, with a high A + T content of 64.05%. The phylogenetic analysis suggested that hippolytidae shrimp may be considered as the polyphyletic taxon. These results are useful for understanding the phylogenetic relationships and evolution of Hippolytidae shrimp.http://dx.doi.org/10.1080/23802359.2020.1842262lysmata amboinensismitochondrial genomephylogenetic analysishippolytidae |
| spellingShingle | Yan Wang Ling Zeng Jing Wen Xuyan Li Yafen Huang Yulin Sun Juan Zhao Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis Mitochondrial DNA. Part B. Resources lysmata amboinensis mitochondrial genome phylogenetic analysis hippolytidae |
| title | Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis |
| title_full | Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis |
| title_fullStr | Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis |
| title_full_unstemmed | Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis |
| title_short | Characterization of the complete mitochondrial genome of Lysmata amboinensis (Hippolytidae, Decapoda) and its phylogenetic analysis |
| title_sort | characterization of the complete mitochondrial genome of lysmata amboinensis hippolytidae decapoda and its phylogenetic analysis |
| topic | lysmata amboinensis mitochondrial genome phylogenetic analysis hippolytidae |
| url | http://dx.doi.org/10.1080/23802359.2020.1842262 |
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