Molecular characterization of ginger genotypes using RAPD and SSR markers
Genetic diversity among ginger genotypes collected from different parts of the country was studied using molecular markers (30 RAPD and 55 SSR). Compared to RAPD primers SSR primers were efficient in distinguishing the genotypes. A total of 86 and 23 polymorphic bands were observed with RAPD and SS...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Society for Promotion of Horticulture - Indian Institute of Horticultural Research
2022-09-01
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| Series: | Journal of Horticultural Sciences |
| Subjects: | |
| Online Access: | https://jhs.iihr.res.in/index.php/jhs/article/view/1052 |
| _version_ | 1797737951136841728 |
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| author | Akshitha HJ Prasath D Umesha K Mohammed Faisal P Venkataravanappa V |
| author_facet | Akshitha HJ Prasath D Umesha K Mohammed Faisal P Venkataravanappa V |
| author_sort | Akshitha HJ |
| collection | DOAJ |
| description |
Genetic diversity among ginger genotypes collected from different parts of the country was studied using molecular markers (30 RAPD and 55 SSR). Compared to RAPD primers SSR primers were efficient in distinguishing the genotypes. A total of 86 and 23 polymorphic bands were observed with RAPD and SSR primers, respectively. Percentage polymorphism observed between RAPD and SSR primers was 97.40 % and 56.54 %. Grouping of genotypes by using combined data of RAPD and SSR primers indicated that irrespective of their place of collection or geographical origin, 30 genotypes were clustered into different groups which showed that, each individual genotype is having wider variability or it might be due to the genetic similarity existing among them.
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| first_indexed | 2024-03-12T13:35:53Z |
| format | Article |
| id | doaj.art-e0c56618ddd14a319e26dda94273b27f |
| institution | Directory Open Access Journal |
| issn | 0973-354X 2582-4899 |
| language | English |
| last_indexed | 2024-03-12T13:35:53Z |
| publishDate | 2022-09-01 |
| publisher | Society for Promotion of Horticulture - Indian Institute of Horticultural Research |
| record_format | Article |
| series | Journal of Horticultural Sciences |
| spelling | doaj.art-e0c56618ddd14a319e26dda94273b27f2023-08-24T05:07:59ZengSociety for Promotion of Horticulture - Indian Institute of Horticultural ResearchJournal of Horticultural Sciences0973-354X2582-48992022-09-0117110.24154/jhs.v17i1.10521040Molecular characterization of ginger genotypes using RAPD and SSR markersAkshitha HJ0Prasath D1Umesha K2Mohammed Faisal P3Venkataravanappa V4College of Horticulture, UHS Campus, Bengaluru, Karnataka, IndiaICAR-Indian Institute of Spices Research, Kozhikode, Kerala, IndiaCollege of Horticulture, UHS Campus, Bengaluru, Karnataka, IndiaICAR-Indian Institute of Spices Research Regional Station, Appangala, Karnataka, IndiaICAR-IIHR Central Horticultural Experiment Station, Chettalli, Karnataka, India Genetic diversity among ginger genotypes collected from different parts of the country was studied using molecular markers (30 RAPD and 55 SSR). Compared to RAPD primers SSR primers were efficient in distinguishing the genotypes. A total of 86 and 23 polymorphic bands were observed with RAPD and SSR primers, respectively. Percentage polymorphism observed between RAPD and SSR primers was 97.40 % and 56.54 %. Grouping of genotypes by using combined data of RAPD and SSR primers indicated that irrespective of their place of collection or geographical origin, 30 genotypes were clustered into different groups which showed that, each individual genotype is having wider variability or it might be due to the genetic similarity existing among them. https://jhs.iihr.res.in/index.php/jhs/article/view/1052gingermolecular markersmonomorphicpolymorphic |
| spellingShingle | Akshitha HJ Prasath D Umesha K Mohammed Faisal P Venkataravanappa V Molecular characterization of ginger genotypes using RAPD and SSR markers Journal of Horticultural Sciences ginger molecular markers monomorphic polymorphic |
| title | Molecular characterization of ginger genotypes using RAPD and SSR markers |
| title_full | Molecular characterization of ginger genotypes using RAPD and SSR markers |
| title_fullStr | Molecular characterization of ginger genotypes using RAPD and SSR markers |
| title_full_unstemmed | Molecular characterization of ginger genotypes using RAPD and SSR markers |
| title_short | Molecular characterization of ginger genotypes using RAPD and SSR markers |
| title_sort | molecular characterization of ginger genotypes using rapd and ssr markers |
| topic | ginger molecular markers monomorphic polymorphic |
| url | https://jhs.iihr.res.in/index.php/jhs/article/view/1052 |
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