Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital

Background We established a glioma biobank at Beijing Tiantan Hospital in November, 2010. Specialized residents have been trained to collect, store and manage the biobank in accordance with standard operating procedures. Methods One hundred samples were selected to evaluate the quality of glioma sam...

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Main Authors: Fanhong Kong, Wenli Zhang, Lin Qiao, Qi Li, Haowen Li, Jingli Cao, Wenyan He, Chengya Dong, Yanjiao He, Lu He, Li Liu, Weilun Fu, Lijun Liu, Zirui Li, Yajie Wang
Format: Article
Language:English
Published: PeerJ Inc. 2018-03-01
Series:PeerJ
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Online Access:https://peerj.com/articles/4450.pdf
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author Fanhong Kong
Wenli Zhang
Lin Qiao
Qi Li
Haowen Li
Jingli Cao
Wenyan He
Chengya Dong
Yanjiao He
Lu He
Li Liu
Weilun Fu
Lijun Liu
Zirui Li
Yajie Wang
author_facet Fanhong Kong
Wenli Zhang
Lin Qiao
Qi Li
Haowen Li
Jingli Cao
Wenyan He
Chengya Dong
Yanjiao He
Lu He
Li Liu
Weilun Fu
Lijun Liu
Zirui Li
Yajie Wang
author_sort Fanhong Kong
collection DOAJ
description Background We established a glioma biobank at Beijing Tiantan Hospital in November, 2010. Specialized residents have been trained to collect, store and manage the biobank in accordance with standard operating procedures. Methods One hundred samples were selected to evaluate the quality of glioma samples stored in the liquid nitrogen tank during different periods (from 2011 to 2015) by morphological examination, RNA integrity determination, DNA integrity determination and housekeeping gene expression determination. Results The majority of samples (95%) had high RNA quality for further analysis with RIN ≥6. Quality of DNA of all samples were stable without significant degradation. Conclusion Storage conditions of our biobank are suitable for long-term (at least five years) sample preservation with high molecular quality.
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spelling doaj.art-e15940f34f404b7592b8c1fef102be422023-12-03T11:01:18ZengPeerJ Inc.PeerJ2167-83592018-03-016e445010.7717/peerj.4450Establishment and quality evaluation of a glioma biobank in Beijing Tiantan HospitalFanhong Kong0Wenli Zhang1Lin Qiao2Qi Li3Haowen Li4Jingli Cao5Wenyan He6Chengya Dong7Yanjiao He8Lu He9Li Liu10Weilun Fu11Lijun Liu12Zirui Li13Yajie Wang14Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaBeijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaNeuropathological department, Beijing Neurosugical Institute, Capital Medical University, Beijing, ChinaBeijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaBeijing Tiantan Hospital, Capital Medical University, Beijing, ChinaDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USAClinical Medical Research Laboratory, Beijing Tiantan Hospital, Capital Medical University, Beijing, ChinaClinical Laboratory, Beijing Ditan Hospital, Capital Medical University, Beijing, ChinaBackground We established a glioma biobank at Beijing Tiantan Hospital in November, 2010. Specialized residents have been trained to collect, store and manage the biobank in accordance with standard operating procedures. Methods One hundred samples were selected to evaluate the quality of glioma samples stored in the liquid nitrogen tank during different periods (from 2011 to 2015) by morphological examination, RNA integrity determination, DNA integrity determination and housekeeping gene expression determination. Results The majority of samples (95%) had high RNA quality for further analysis with RIN ≥6. Quality of DNA of all samples were stable without significant degradation. Conclusion Storage conditions of our biobank are suitable for long-term (at least five years) sample preservation with high molecular quality.https://peerj.com/articles/4450.pdfGliomaBiobankQuality evaluation
spellingShingle Fanhong Kong
Wenli Zhang
Lin Qiao
Qi Li
Haowen Li
Jingli Cao
Wenyan He
Chengya Dong
Yanjiao He
Lu He
Li Liu
Weilun Fu
Lijun Liu
Zirui Li
Yajie Wang
Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital
PeerJ
Glioma
Biobank
Quality evaluation
title Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital
title_full Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital
title_fullStr Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital
title_full_unstemmed Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital
title_short Establishment and quality evaluation of a glioma biobank in Beijing Tiantan Hospital
title_sort establishment and quality evaluation of a glioma biobank in beijing tiantan hospital
topic Glioma
Biobank
Quality evaluation
url https://peerj.com/articles/4450.pdf
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