The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae)
Castanopsis sieboldii (Makino) Hatus is an evergreen tree that distributes in Eastern Asia including Islands of Korea and Japan. The chloroplast genome of C. sieboldii was successfully sequenced. Its length is 160,705 bp long (GC ratio is 36.8%) and has four subregions: 90,821 bp of large single cop...
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2021-09-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2021.1966339 |
| _version_ | 1797638749441490944 |
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| author | Jongsun Park Hong Xi Janghyuk Son Hyun Tak Shin Hyunmi Kang Seokgon Park |
| author_facet | Jongsun Park Hong Xi Janghyuk Son Hyun Tak Shin Hyunmi Kang Seokgon Park |
| author_sort | Jongsun Park |
| collection | DOAJ |
| description | Castanopsis sieboldii (Makino) Hatus is an evergreen tree that distributes in Eastern Asia including Islands of Korea and Japan. The chloroplast genome of C. sieboldii was successfully sequenced. Its length is 160,705 bp long (GC ratio is 36.8%) and has four subregions: 90,821 bp of large single copy (34.6%) and 19,014 bp of small single copy (30.8%) regions are separated by 25,075 bp of inverted repeat (42.8%) regions including 134 genes (89 protein-coding genes, eight rRNAs, and 37 tRNAs). Interspecific variations of Castanopsis are at a moderate level in comparison to those of the other genera. Phylogenetic trees show that C. sieboldii chloroplast genome was clustered with the other two Castanopsis species. |
| first_indexed | 2024-03-11T13:07:57Z |
| format | Article |
| id | doaj.art-e18e576ff5dd4feba25293789e881d77 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:57Z |
| publishDate | 2021-09-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e18e576ff5dd4feba25293789e881d772023-11-03T14:28:30ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-09-01692743274510.1080/23802359.2021.19663391966339The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae)Jongsun Park0Hong Xi1Janghyuk Son2Hyun Tak Shin3Hyunmi Kang4Seokgon Park5InfoBoss IncInfoBoss IncInfoBoss IncDMZ Botanic Garden, Korea National ArboretumDepartment of Landscape Architecture, Mokpo National UniversityDivision of Forest Resources and Landscape Architecture, Sunchon National UniversityCastanopsis sieboldii (Makino) Hatus is an evergreen tree that distributes in Eastern Asia including Islands of Korea and Japan. The chloroplast genome of C. sieboldii was successfully sequenced. Its length is 160,705 bp long (GC ratio is 36.8%) and has four subregions: 90,821 bp of large single copy (34.6%) and 19,014 bp of small single copy (30.8%) regions are separated by 25,075 bp of inverted repeat (42.8%) regions including 134 genes (89 protein-coding genes, eight rRNAs, and 37 tRNAs). Interspecific variations of Castanopsis are at a moderate level in comparison to those of the other genera. Phylogenetic trees show that C. sieboldii chloroplast genome was clustered with the other two Castanopsis species.http://dx.doi.org/10.1080/23802359.2021.1966339chloroplast genomecastanopsis sieboldiiinterspecific variationphylogenetic analysisfagaceae |
| spellingShingle | Jongsun Park Hong Xi Janghyuk Son Hyun Tak Shin Hyunmi Kang Seokgon Park The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae) Mitochondrial DNA. Part B. Resources chloroplast genome castanopsis sieboldii interspecific variation phylogenetic analysis fagaceae |
| title | The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae) |
| title_full | The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae) |
| title_fullStr | The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae) |
| title_full_unstemmed | The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae) |
| title_short | The complete chloroplast genome of Castanopsis sieboldii (Makino) Hatus (Fagaceae) |
| title_sort | complete chloroplast genome of castanopsis sieboldii makino hatus fagaceae |
| topic | chloroplast genome castanopsis sieboldii interspecific variation phylogenetic analysis fagaceae |
| url | http://dx.doi.org/10.1080/23802359.2021.1966339 |
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