Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae)
In this study, the complete mitogenome of the Pawak croaker Pennahia pawak was first determined. This mitogenome is 16,408 bp in length, and consists of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.7% A, 29.5% C, 15.9%...
| Main Authors: | , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2017-01-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2017.1334526 |
| _version_ | 1827774398093852672 |
|---|---|
| author | Bai-An Lin Chang-Chang Guo Min Liu |
| author_facet | Bai-An Lin Chang-Chang Guo Min Liu |
| author_sort | Bai-An Lin |
| collection | DOAJ |
| description | In this study, the complete mitogenome of the Pawak croaker Pennahia pawak was first determined. This mitogenome is 16,408 bp in length, and consists of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.7% A, 29.5% C, 15.9% G, and 26.9% T. Sizes of the 22 tRNA genes range from 66 to 75 bp. One start codons (ATG) and two stop codons (AGA and TAA/TA/T) were detected in 13 protein-coding genes. In the Bayesian tree based on the complete mitogenomes of 17 species (including P. pawak) from the family Sciaenidae, all nodes were strongly supported. The phylogenetic results suggested that P. pawak has the closest relationship to the silver croaker P. argentata, a species from the same genus. |
| first_indexed | 2024-03-11T13:36:48Z |
| format | Article |
| id | doaj.art-e1be198a1b974dcc939050bd9713047e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:36:48Z |
| publishDate | 2017-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e1be198a1b974dcc939050bd9713047e2023-11-02T15:42:56ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592017-01-012136636810.1080/23802359.2017.13345261334526Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae)Bai-An Lin0Chang-Chang Guo1Min Liu2Xiamen UniversityXiamen UniversityXiamen UniversityIn this study, the complete mitogenome of the Pawak croaker Pennahia pawak was first determined. This mitogenome is 16,408 bp in length, and consists of 37 genes with the typical gene order and direction of transcription in vertebrates. The overall nucleotide composition is: 27.7% A, 29.5% C, 15.9% G, and 26.9% T. Sizes of the 22 tRNA genes range from 66 to 75 bp. One start codons (ATG) and two stop codons (AGA and TAA/TA/T) were detected in 13 protein-coding genes. In the Bayesian tree based on the complete mitogenomes of 17 species (including P. pawak) from the family Sciaenidae, all nodes were strongly supported. The phylogenetic results suggested that P. pawak has the closest relationship to the silver croaker P. argentata, a species from the same genus.http://dx.doi.org/10.1080/23802359.2017.1334526bayesian treemitogenomepennahiaperciformesphylogenetic relationshipsciaenidae |
| spellingShingle | Bai-An Lin Chang-Chang Guo Min Liu Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae) Mitochondrial DNA. Part B. Resources bayesian tree mitogenome pennahia perciformes phylogenetic relationship sciaenidae |
| title | Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae) |
| title_full | Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae) |
| title_fullStr | Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae) |
| title_full_unstemmed | Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae) |
| title_short | Complete mitochondrial genome and the phylogenetic position of the Pawak croaker Pennahia pawak (Perciformes: Sciaenidae) |
| title_sort | complete mitochondrial genome and the phylogenetic position of the pawak croaker pennahia pawak perciformes sciaenidae |
| topic | bayesian tree mitogenome pennahia perciformes phylogenetic relationship sciaenidae |
| url | http://dx.doi.org/10.1080/23802359.2017.1334526 |
| work_keys_str_mv | AT baianlin completemitochondrialgenomeandthephylogeneticpositionofthepawakcroakerpennahiapawakperciformessciaenidae AT changchangguo completemitochondrialgenomeandthephylogeneticpositionofthepawakcroakerpennahiapawakperciformessciaenidae AT minliu completemitochondrialgenomeandthephylogeneticpositionofthepawakcroakerpennahiapawakperciformessciaenidae |