The marker-assisted breeding of salinity tolerant forms of rice

The work deals with the study of DNA-markers for obtaining salinity tolerant rice on the basis of varieties of Russian breeding. In order to validate the informational value of the developed marker system and to obtain new salinity tolerant forms there has been carried out a hybridization of salt se...

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Main Authors: K. V. Azarin, A. V. Usatov, M. S. Makarenko, V. A. Khachumov, P. I. Kostylev, E. B. Kudashkina
Format: Article
Language:Russian
Published: Federal State Budgetary Scientific Institution “Agricultural Research Center “Donskoy”" 2018-05-01
Series:Зерновое хозяйство России
Subjects:
Online Access:https://www.zhros.online/jour/article/view/7
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author K. V. Azarin
A. V. Usatov
M. S. Makarenko
V. A. Khachumov
P. I. Kostylev
E. B. Kudashkina
author_facet K. V. Azarin
A. V. Usatov
M. S. Makarenko
V. A. Khachumov
P. I. Kostylev
E. B. Kudashkina
author_sort K. V. Azarin
collection DOAJ
description The work deals with the study of DNA-markers for obtaining salinity tolerant rice on the basis of varieties of Russian breeding. In order to validate the informational value of the developed marker system and to obtain new salinity tolerant forms there has been carried out a hybridization of salt sensitive domestic variety ‘Novator’ with the lines ‘IR 52713-2B-8-2B-1-2’, ‘IR 74099-3R-3-3’, ‘IR 61920-3B-22-2-1 (NSIC Rc 106)’ as the donors of the locus of salinity tolerance SalTol QTL. The samples salinity response was assessed with 1.0% of NaCl concentrate. The plants were grown in the climatic chamber with the temperature of 26ºС, 70% of humidity and light cycle of 14/10 hours. In 14 days the length of the roots and sprouts and the per cent of seed germination were calculated. The markers ‘RM 140’, ‘RM 237’, ‘RM 8094’, ‘RM 8095’, ‘RM 3412’, ‘RM 7075’, ‘RM 8046’, ‘AUT 10777’, ‘RM 3412 b’, ‘RM 10746’, ‘RM 10782’, ‘RM 493’, ‘RM 10776’, ‘RM 10793’ with the locus of salinity tolerance SalTol were used in the SSR-analysis. It has been shown that the co-dominant markers ‘RM 493’ and ‘RM 7075’ possess high efficiency during the introduction of the locus SalTol QTL into the domestic varieties of rice. 90 samples have been selected from the plants of the second generation, which were analyzed on the presence of the introduced alleles SalTol with the PCR-method. The DNA-analysis of the hybrids F2, obtained from the hybridization of the highly productive early-maturing variety ‘Novator’ and the lines-donors of SalTol ‘IR 52713-2B-8-2B-1-2’, ‘IR 74099-3R-3-3’, ‘IR 61920-3B-22-2-1 (NSIC Rc 106)’ determined that 17 samples were salinity tolerant in homozygous state, 29 samples had the allele SalTol in heterozygous state and the rest of the studied plants had only the alleles inherited from the variety ‘Novator’.
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spelling doaj.art-e1f238c5bcfa4548ae7f3c92f24a5dd82023-09-03T11:05:26ZrusFederal State Budgetary Scientific Institution “Agricultural Research Center “Donskoy”"Зерновое хозяйство России2079-87252079-87332018-05-0148628327The marker-assisted breeding of salinity tolerant forms of riceK. V. Azarin0A. V. Usatov1M. S. Makarenko2V. A. Khachumov3P. I. Kostylev4E. B. Kudashkina5Академия биологии и биотехнологии, Южный федеральный университетАкадемия биологии и биотехнологии, Южный федеральный университетАкадемия биологии и биотехнологии, Южный федеральный университетАкадемия биологии и биотехнологии, Южный федеральный университетФБГНУ Всероссийский научно-исследовательский институт зерновых культур им. И.Г. КалиненкоАзово-Черноморский инженерный институт ФГБОУ ВО Донской ГАУThe work deals with the study of DNA-markers for obtaining salinity tolerant rice on the basis of varieties of Russian breeding. In order to validate the informational value of the developed marker system and to obtain new salinity tolerant forms there has been carried out a hybridization of salt sensitive domestic variety ‘Novator’ with the lines ‘IR 52713-2B-8-2B-1-2’, ‘IR 74099-3R-3-3’, ‘IR 61920-3B-22-2-1 (NSIC Rc 106)’ as the donors of the locus of salinity tolerance SalTol QTL. The samples salinity response was assessed with 1.0% of NaCl concentrate. The plants were grown in the climatic chamber with the temperature of 26ºС, 70% of humidity and light cycle of 14/10 hours. In 14 days the length of the roots and sprouts and the per cent of seed germination were calculated. The markers ‘RM 140’, ‘RM 237’, ‘RM 8094’, ‘RM 8095’, ‘RM 3412’, ‘RM 7075’, ‘RM 8046’, ‘AUT 10777’, ‘RM 3412 b’, ‘RM 10746’, ‘RM 10782’, ‘RM 493’, ‘RM 10776’, ‘RM 10793’ with the locus of salinity tolerance SalTol were used in the SSR-analysis. It has been shown that the co-dominant markers ‘RM 493’ and ‘RM 7075’ possess high efficiency during the introduction of the locus SalTol QTL into the domestic varieties of rice. 90 samples have been selected from the plants of the second generation, which were analyzed on the presence of the introduced alleles SalTol with the PCR-method. The DNA-analysis of the hybrids F2, obtained from the hybridization of the highly productive early-maturing variety ‘Novator’ and the lines-donors of SalTol ‘IR 52713-2B-8-2B-1-2’, ‘IR 74099-3R-3-3’, ‘IR 61920-3B-22-2-1 (NSIC Rc 106)’ determined that 17 samples were salinity tolerant in homozygous state, 29 samples had the allele SalTol in heterozygous state and the rest of the studied plants had only the alleles inherited from the variety ‘Novator’.https://www.zhros.online/jour/article/view/7риссортсолеустойчивостьднк-маркерыssr анализлокус saltolricevarietysalinity tolerancedna-markersssr-analysislocus saltol
spellingShingle K. V. Azarin
A. V. Usatov
M. S. Makarenko
V. A. Khachumov
P. I. Kostylev
E. B. Kudashkina
The marker-assisted breeding of salinity tolerant forms of rice
Зерновое хозяйство России
рис
сорт
солеустойчивость
днк-маркеры
ssr анализ
локус saltol
rice
variety
salinity tolerance
dna-markers
ssr-analysis
locus saltol
title The marker-assisted breeding of salinity tolerant forms of rice
title_full The marker-assisted breeding of salinity tolerant forms of rice
title_fullStr The marker-assisted breeding of salinity tolerant forms of rice
title_full_unstemmed The marker-assisted breeding of salinity tolerant forms of rice
title_short The marker-assisted breeding of salinity tolerant forms of rice
title_sort marker assisted breeding of salinity tolerant forms of rice
topic рис
сорт
солеустойчивость
днк-маркеры
ssr анализ
локус saltol
rice
variety
salinity tolerance
dna-markers
ssr-analysis
locus saltol
url https://www.zhros.online/jour/article/view/7
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AT msmakarenko themarkerassistedbreedingofsalinitytolerantformsofrice
AT vakhachumov themarkerassistedbreedingofsalinitytolerantformsofrice
AT pikostylev themarkerassistedbreedingofsalinitytolerantformsofrice
AT ebkudashkina themarkerassistedbreedingofsalinitytolerantformsofrice
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AT avusatov markerassistedbreedingofsalinitytolerantformsofrice
AT msmakarenko markerassistedbreedingofsalinitytolerantformsofrice
AT vakhachumov markerassistedbreedingofsalinitytolerantformsofrice
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