When should we order a next generation sequencing test in a patient with cancer?

Technical advances in genome sequencing and the implementation of next-generation sequencing (NGS) in clinical oncology have paved the way for individualizing cancer patient therapy based on molecular profiles. When and how to use NGS testing in the clinic is at present an unsolved issue, although n...

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Main Authors: Ramon Colomer, Rebeca Mondejar, Nuria Romero-Laorden, Arantzazu Alfranca, Francisco Sanchez-Madrid, Miguel Quintela-Fandino
Format: Article
Language:English
Published: Elsevier 2020-08-01
Series:EClinicalMedicine
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2589537020302315
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author Ramon Colomer
Rebeca Mondejar
Nuria Romero-Laorden
Arantzazu Alfranca
Francisco Sanchez-Madrid
Miguel Quintela-Fandino
author_facet Ramon Colomer
Rebeca Mondejar
Nuria Romero-Laorden
Arantzazu Alfranca
Francisco Sanchez-Madrid
Miguel Quintela-Fandino
author_sort Ramon Colomer
collection DOAJ
description Technical advances in genome sequencing and the implementation of next-generation sequencing (NGS) in clinical oncology have paved the way for individualizing cancer patient therapy based on molecular profiles. When and how to use NGS testing in the clinic is at present an unsolved issue, although new research results provide evidence favoring this approach in some types of advanced cancer. Clinical research is evolving rapidly, from basket and umbrella trials to adaptative design precision oncology clinical studies, and genomic and molecular data often displace the classical clinical validation procedures of biomarkers. In this context, physicians must be aware of the clinical evidence behind these new biomarkers and NGS tests available, in order to use them in the right moment, and with a critical point of view. This review will present the status of currently available targeted drugs that can be effective based on actionable molecular alterations, and the NGS tests that are currently available, offering a practical guide for the application of Clinical Precision Oncology in the real world routine practice.
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spelling doaj.art-e1f26395b6474bfa9841102a9061406a2022-12-21T18:48:40ZengElsevierEClinicalMedicine2589-53702020-08-0125100487When should we order a next generation sequencing test in a patient with cancer?Ramon Colomer0Rebeca Mondejar1Nuria Romero-Laorden2Arantzazu Alfranca3Francisco Sanchez-Madrid4Miguel Quintela-Fandino5Departament of Medicine, Universidad Autónoma de Madrid (UAM), Spain; Medical Oncology Division, Hospital Universitario La Princesa, Madrid, Spain; Endowed Chair of Personalised Precision Medicine, Universidad Autónoma de Madrid (UAM)-Fundación Instituto Roche, Spain; Centro Nacional de Investigaciones Oncológicas (CNIO), Madrid, Spain; Corresponding author.Departament of Medicine, Universidad Autónoma de Madrid (UAM), Spain; Medical Oncology Division, Hospital Universitario La Princesa, Madrid, Spain; Endowed Chair of Personalised Precision Medicine, Universidad Autónoma de Madrid (UAM)-Fundación Instituto Roche, SpainMedical Oncology Division, Hospital Universitario La Princesa, Madrid, Spain; Centro Nacional de Investigaciones Oncológicas (CNIO), Madrid, SpainImmunology Division, Hospital Universitario La Princesa, Madrid, SpainDepartament of Medicine, Universidad Autónoma de Madrid (UAM), Spain; Endowed Chair of Personalised Precision Medicine, Universidad Autónoma de Madrid (UAM)-Fundación Instituto Roche, Spain; Immunology Division, Hospital Universitario La Princesa, Madrid, SpainDepartament of Medicine, Universidad Autónoma de Madrid (UAM), Spain; Centro Nacional de Investigaciones Oncológicas (CNIO), Madrid, Spain; Medical Oncology Division, Hospital Universitario Quirón, Pozuelo de Alarcón – Madrid, SpainTechnical advances in genome sequencing and the implementation of next-generation sequencing (NGS) in clinical oncology have paved the way for individualizing cancer patient therapy based on molecular profiles. When and how to use NGS testing in the clinic is at present an unsolved issue, although new research results provide evidence favoring this approach in some types of advanced cancer. Clinical research is evolving rapidly, from basket and umbrella trials to adaptative design precision oncology clinical studies, and genomic and molecular data often displace the classical clinical validation procedures of biomarkers. In this context, physicians must be aware of the clinical evidence behind these new biomarkers and NGS tests available, in order to use them in the right moment, and with a critical point of view. This review will present the status of currently available targeted drugs that can be effective based on actionable molecular alterations, and the NGS tests that are currently available, offering a practical guide for the application of Clinical Precision Oncology in the real world routine practice.http://www.sciencedirect.com/science/article/pii/S2589537020302315Precision oncologyPersonalised medicineNext generation sequencingCancer GenomicsCancer TherapyTargeted therapy
spellingShingle Ramon Colomer
Rebeca Mondejar
Nuria Romero-Laorden
Arantzazu Alfranca
Francisco Sanchez-Madrid
Miguel Quintela-Fandino
When should we order a next generation sequencing test in a patient with cancer?
EClinicalMedicine
Precision oncology
Personalised medicine
Next generation sequencing
Cancer Genomics
Cancer Therapy
Targeted therapy
title When should we order a next generation sequencing test in a patient with cancer?
title_full When should we order a next generation sequencing test in a patient with cancer?
title_fullStr When should we order a next generation sequencing test in a patient with cancer?
title_full_unstemmed When should we order a next generation sequencing test in a patient with cancer?
title_short When should we order a next generation sequencing test in a patient with cancer?
title_sort when should we order a next generation sequencing test in a patient with cancer
topic Precision oncology
Personalised medicine
Next generation sequencing
Cancer Genomics
Cancer Therapy
Targeted therapy
url http://www.sciencedirect.com/science/article/pii/S2589537020302315
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