The Annona montana genome reveals the development and flavor formation in mountain soursop fruit
Annona is a genus of family Annonaceae within the magnoliids and plays a crucial role in revealing the evolution of magnolias. Annona species provide important fruit resources. Here, we report a chromosome-level genome assembly of A. montana, an edible and ornamental fruit species. Integration with...
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| Format: | Article |
| Language: | English |
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Maximum Academic Press
2023-01-01
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| Series: | Ornamental Plant Research |
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| Online Access: | https://www.maxapress.com/article/doi/10.48130/OPR-2023-0014 |
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| author | Guangda Tang Guizhen Chen Jianhao Ke Jieyu Wang Diyang Zhang Dingkun Liu Jie Huang Sijin Zeng Miao Liao Xuefen Wei Zihao Huang Minghui Ou Jian Zeng Hao Wu Jie Zheng Kewei Liu Weihong Sun Xuedie Liu Xia Yu Xinyu Xu Xuewei Zhao Yuanyuan Li Zhuang Zhao Deqiang Chen Qinyao Zheng Xin He Mengmeng Zhang Ye Huang Cuili Zhang Minghe Li Zhiwen Wang Sagheer Ahmad Shengxin Chang Shuangquan Zou Laiqiang Huang Donghui Peng Siren Lan Zhongjian Liu |
| author_facet | Guangda Tang Guizhen Chen Jianhao Ke Jieyu Wang Diyang Zhang Dingkun Liu Jie Huang Sijin Zeng Miao Liao Xuefen Wei Zihao Huang Minghui Ou Jian Zeng Hao Wu Jie Zheng Kewei Liu Weihong Sun Xuedie Liu Xia Yu Xinyu Xu Xuewei Zhao Yuanyuan Li Zhuang Zhao Deqiang Chen Qinyao Zheng Xin He Mengmeng Zhang Ye Huang Cuili Zhang Minghe Li Zhiwen Wang Sagheer Ahmad Shengxin Chang Shuangquan Zou Laiqiang Huang Donghui Peng Siren Lan Zhongjian Liu |
| author_sort | Guangda Tang |
| collection | DOAJ |
| description | Annona is a genus of family Annonaceae within the magnoliids and plays a crucial role in revealing the evolution of magnolias. Annona species provide important fruit resources. Here, we report a chromosome-level genome assembly of A. montana, an edible and ornamental fruit species. Integration with other genomes provides clear evidence that the magnoliids were sisters to eudicots, and the ASTRAL trees showed discordance in the phylogenetic position of magnoliids, which might be caused by incomplete lineage sorting (ILS). Whole genome duplication (WGD) analysis showed that the common ancestor of A. montana and Liriodendron chinense experienced a WGD event, and this WGD event occurred after the splitting of Magnoliales and Laurales. We identified the gene family expansions and contractions in Annonaceae. Based on the identification of MADS-box gene families, we inferred the pathway integrators of morphological regulation, the occurrence of florescence and the development of fruit in A. montana. In addition, we identified key sugar transporter genes and the key enzyme genes related to sugar accumulation in A. montana fruit. The gene function analysis indicated that starch and cell wall degradation might be the main reasons for the softening of A. montana fruit. Furthermore, aromatic alcohols were suggested be the main volatile aromatic compounds in A. montana fruit. Our results provide the genetic basis of fruit development, softening, aroma, and sugar accumulation in A. montana and the evolution and diversification of Annonaceae. |
| first_indexed | 2024-03-07T20:10:20Z |
| format | Article |
| id | doaj.art-e272becb59bf49868c6faf2b2d90a09c |
| institution | Directory Open Access Journal |
| issn | 2769-2094 |
| language | English |
| last_indexed | 2024-03-07T20:10:20Z |
| publishDate | 2023-01-01 |
| publisher | Maximum Academic Press |
| record_format | Article |
| series | Ornamental Plant Research |
| spelling | doaj.art-e272becb59bf49868c6faf2b2d90a09c2024-02-28T01:52:56ZengMaximum Academic PressOrnamental Plant Research2769-20942023-01-013111310.48130/OPR-2023-0014OPR-2023-0014The Annona montana genome reveals the development and flavor formation in mountain soursop fruitGuangda Tang0Guizhen Chen1Jianhao Ke2Jieyu Wang3Diyang Zhang4Dingkun Liu5Jie Huang6Sijin Zeng7Miao Liao8Xuefen Wei9Zihao Huang10Minghui Ou11Jian Zeng12Hao Wu13Jie Zheng14Kewei Liu15Weihong Sun16Xuedie Liu17Xia Yu18Xinyu Xu19Xuewei Zhao20Yuanyuan Li21Zhuang Zhao22Deqiang Chen23Qinyao Zheng24Xin He25Mengmeng Zhang26Ye Huang27Cuili Zhang28Minghe Li29Zhiwen Wang30Sagheer Ahmad31Shengxin Chang32Shuangquan Zou33Laiqiang Huang34Donghui Peng35Siren Lan36Zhongjian Liu37College of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Agriculture, South China Agricultural University, Guangzhou 510642, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaHenry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, ChinaHenry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, ChinaHenry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, ChinaTsinghua-Berkeley Shenzhen Institute (TBSI), Center for Biotechnology and Biomedicine, Shenzhen Key Laboratory of Gene and Antibody Therapy, State Key Laboratory of Chemical Oncogenomics, State Key Laboratory of Health Sciences and Technology, Institute of Biopharmaceutical and Health Engineering (iBHE), Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaPubBio-Tech, Wuhan 430070, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaHenry Fok College of Biology and Agriculture, Shaoguan University, Shaoguan 512005, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaTsinghua-Berkeley Shenzhen Institute (TBSI), Center for Biotechnology and Biomedicine, Shenzhen Key Laboratory of Gene and Antibody Therapy, State Key Laboratory of Chemical Oncogenomics, State Key Laboratory of Health Sciences and Technology, Institute of Biopharmaceutical and Health Engineering (iBHE), Shenzhen International Graduate School, Tsinghua University, Shenzhen 518055, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaKey Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture and Art, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Forestry and Landscape Architecture, South China Agricultural University, Guangzhou 510642, ChinaAnnona is a genus of family Annonaceae within the magnoliids and plays a crucial role in revealing the evolution of magnolias. Annona species provide important fruit resources. Here, we report a chromosome-level genome assembly of A. montana, an edible and ornamental fruit species. Integration with other genomes provides clear evidence that the magnoliids were sisters to eudicots, and the ASTRAL trees showed discordance in the phylogenetic position of magnoliids, which might be caused by incomplete lineage sorting (ILS). Whole genome duplication (WGD) analysis showed that the common ancestor of A. montana and Liriodendron chinense experienced a WGD event, and this WGD event occurred after the splitting of Magnoliales and Laurales. We identified the gene family expansions and contractions in Annonaceae. Based on the identification of MADS-box gene families, we inferred the pathway integrators of morphological regulation, the occurrence of florescence and the development of fruit in A. montana. In addition, we identified key sugar transporter genes and the key enzyme genes related to sugar accumulation in A. montana fruit. The gene function analysis indicated that starch and cell wall degradation might be the main reasons for the softening of A. montana fruit. Furthermore, aromatic alcohols were suggested be the main volatile aromatic compounds in A. montana fruit. Our results provide the genetic basis of fruit development, softening, aroma, and sugar accumulation in A. montana and the evolution and diversification of Annonaceae.https://www.maxapress.com/article/doi/10.48130/OPR-2023-0014annona montanafruit developmentsofteningaromasugar accumulation |
| spellingShingle | Guangda Tang Guizhen Chen Jianhao Ke Jieyu Wang Diyang Zhang Dingkun Liu Jie Huang Sijin Zeng Miao Liao Xuefen Wei Zihao Huang Minghui Ou Jian Zeng Hao Wu Jie Zheng Kewei Liu Weihong Sun Xuedie Liu Xia Yu Xinyu Xu Xuewei Zhao Yuanyuan Li Zhuang Zhao Deqiang Chen Qinyao Zheng Xin He Mengmeng Zhang Ye Huang Cuili Zhang Minghe Li Zhiwen Wang Sagheer Ahmad Shengxin Chang Shuangquan Zou Laiqiang Huang Donghui Peng Siren Lan Zhongjian Liu The Annona montana genome reveals the development and flavor formation in mountain soursop fruit Ornamental Plant Research annona montana fruit development softening aroma sugar accumulation |
| title | The Annona montana genome reveals the development and flavor formation in mountain soursop fruit |
| title_full | The Annona montana genome reveals the development and flavor formation in mountain soursop fruit |
| title_fullStr | The Annona montana genome reveals the development and flavor formation in mountain soursop fruit |
| title_full_unstemmed | The Annona montana genome reveals the development and flavor formation in mountain soursop fruit |
| title_short | The Annona montana genome reveals the development and flavor formation in mountain soursop fruit |
| title_sort | annona montana genome reveals the development and flavor formation in mountain soursop fruit |
| topic | annona montana fruit development softening aroma sugar accumulation |
| url | https://www.maxapress.com/article/doi/10.48130/OPR-2023-0014 |
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