Techniques for transferring host-pathogen protein interactions knowledge to new tasks

Techniques for transferring host-pathogen protein interactions knowledge to new tasks

We consider the problem of building a model to predict protein-protein interactions (PPIs) between the bacterial species Salmonella Typhimurium and the plant host Arabidopsis thaliana which is a host-pathogen pair for which no known PPIs are available. To achieve this, we present approaches, which u...

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Bibliographic Details
Main Authors:	Meghana eKshirsagar, Sylvia eSchleker, Jaime eCarbonell, Judith eKlein-Seetharaman
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2015-02-01
Series:	Frontiers in Microbiology
Subjects:	Transfer Learning protein interaction prediction host pathogen protein interactions plant pathogen protein interactions machine learning methods Kernel mean matching
Online Access:	http://journal.frontiersin.org/Journal/10.3389/fmicb.2015.00036/full

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