Novel immune-related prognostic model and nomogram for breast cancer based on ssGSEA

Novel immune-related prognostic model and nomogram for breast cancer based on ssGSEA

This study aimed to construct an immune-related prognostic model and a nomogram to predict the 1-, 3-, and 5-year overall survival (OS) of breast cancer patients. We applied single-sample gene set enrichment analysis to classify 1,053 breast cancer samples from The Cancer Genome Atlas (TCGA) databas...

Full description

Bibliographic Details
Main Authors:	Linrong Li, Lin Li, Mohan Liu, Yan Li, Qiang Sun
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2023-01-01
Series:	Frontiers in Genetics
Subjects:	immune prognostic model breast cancer ssGSEA nomogram
Online Access:	https://www.frontiersin.org/articles/10.3389/fgene.2022.957675/full

Similar Items

Identification of novel subtypes based on ssGSEA in immune‐related prognostic signature for tongue squamous cell carcinoma
by: Yi Jin, et al.
Published: (2021-12-01)

Identification and Verification of Immune-Related Genes Prognostic Signature Based on ssGSEA for Adrenocortical Carcinoma (ACC)
by: Yuan K, et al.
Published: (2022-02-01)

Development of an Immune-Related Gene Signature for Prognosis in Melanoma
by: Jia-An Zhang, et al.
Published: (2021-01-01)

Identification and validation of a pyroptosis-related prognostic signature for thyroid cancer
by: Pu Wu, et al.
Published: (2021-10-01)

Construction and validation of a prognosis signature based on the immune microenvironment in gastric cancer
by: Li-Hong Wu, et al.
Published: (2023-03-01)

Development and verification of a 7-lncRNA prognostic model based on tumor immunity for patients with ovarian cancer
by: Jing Feng, et al.
Published: (2023-02-01)

The Prognostic Value of Integrated Analysis of Inflammation and Hypoxia-Related Genes in Idiopathic Pulmonary Fibrosis
by: Jun Liu, et al.
Published: (2022-03-01)

Bioinformatics reveals diagnostic potential of cuproptosis-related genes in the pathogenesis of sepsis
by: Zhongyi Sun, et al.
Published: (2024-01-01)

Generation and Analysis of Pyroptosis-Based and Immune-Based Signatures for Kidney Renal Clear Cell Carcinoma Patients, and Cell Experiment
by: Gaoteng Lin, et al.
Published: (2022-02-01)

Identification of an Immune Gene-Associated Prognostic Signature and Its Association With a Poor Prognosis in Gastric Cancer Patients
by: Xiaoqing Guan, et al.
Published: (2021-02-01)

Identification of Immune-Related Genes Associated With Bladder Cancer Based on Immunological Characteristics and Their Correlation With the Prognosis
by: Zhen Kang, et al.
Published: (2021-11-01)

Identifying immune cell infiltration and effective diagnostic biomarkers in Crohn’s disease by bioinformatics analysis
by: Rong Huang, et al.
Published: (2023-08-01)

A novel risk score model based on gamma-aminobutyric acid signature predicts the survival prognosis of patients with breast cancer
by: Liping Yang, et al.
Published: (2023-03-01)

System analysis based on the migration- and invasion-related gene sets identifies the infiltration-related genes of glioma
by: Shuang Shi, et al.
Published: (2023-04-01)

Construction of prediction model of inflammation related genes in idiopathic pulmonary fibrosis and its correlation with immune microenvironment
by: Ying-Qiu Yin, et al.
Published: (2022-12-01)

Construction and validation of a gene signature related to bladder urothelial carcinoma based on immune gene analysis
by: Peng Xing, et al.
Published: (2022-08-01)

OGDHL closely associates with tumor microenvironment and can serve as a prognostic biomarker for papillary thyroid cancer
by: Min Mao, et al.
Published: (2021-01-01)

Development and validation of an immune‐related gene signature for prognosis in Lung adenocarcinoma
by: Zehuai Guo, et al.
Published: (2023-02-01)

Construction of a Six-Gene Prognostic Risk Model Related to Hypoxia and Angiogenesis for Cervical Cancer
by: Lili Liu, et al.
Published: (2022-06-01)

Prognostic and Predictive Value of Immune-Related Gene Pair Signature in Primary Lower-Grade Glioma Patients
by: Kunjian Lei, et al.
Published: (2021-05-01)

Prognostic characteristics of immune subtypes associated with acute myeloid leukemia and their identification in cell subsets based on single-cell sequencing analysis
by: Jie Lu, et al.
Published: (2022-09-01)

The use of bioinformatics methods to identify the effects of SARS-CoV-2 and influenza viruses on the regulation of gene expression in patients
by: Zhongyi Sun, et al.
Published: (2023-02-01)

Comprehensive analyses of m1A regulator-mediated modification patterns determining prognosis in lower-grade glioma (running title: m1A in LGG)
by: Kunjian Lei, et al.
Published: (2024-03-01)

Bisphenol A promote the cell proliferation and invasion ability of prostate cancer cells via regulating the androgen receptor
by: Dong Zhang, et al.
Published: (2024-01-01)

Identification of a Diagnostic Signature and Immune Cell Infiltration Characteristics in Keloids
by: Yijun Xia, et al.
Published: (2022-05-01)

Hierarchical Clustering of Cutaneous Melanoma Based on Immunogenomic Profiling
by: Jie Yu, et al.
Published: (2020-11-01)

Application of weighted co-expression network analysis and machine learning to identify the pathological mechanism of Alzheimer's disease
by: Keping Chai, et al.
Published: (2022-07-01)

Comprehensive analysis of prognostic gene signatures based on immune infiltration of ovarian cancer
by: Shibai Yan, et al.
Published: (2020-12-01)

The Application of Consensus Weighted Gene Co-expression Network Analysis to Comparative Transcriptome Meta-Datasets of Multiple Sclerosis in Gray and White Matter
by: Keping Chai, et al.
Published: (2022-02-01)

Investigating the role of NPR1 in dilated cardiomyopathy and its potential as a therapeutic target for glucocorticoid therapy
by: Yaomeng Huang, et al.
Published: (2023-11-01)

sc-ImmuCC: hierarchical annotation for immune cell types in single-cell RNA-seq
by: Ying Jiang, et al.
Published: (2023-07-01)

Corrigendum: Integrated analysis of single-cell RNA-seq and chipset data unravels PANoptosis-related genes in sepsis
by: Wei Dai, et al.
Published: (2024-04-01)

Integrated analysis of single-cell RNA-seq and chipset data unravels PANoptosis-related genes in sepsis
by: Wei Dai, et al.
Published: (2024-01-01)

Proteomic analysis to identification of hypoxia related markers in spinal tuberculosis: a study based on weighted gene co-expression network analysis and machine learning
by: Shaofeng Wu, et al.
Published: (2023-06-01)

Identification of susceptibility modules and hub genes of osteoarthritis by WGCNA analysis
by: Yanchao Wang, et al.
Published: (2022-11-01)

TumorDecon: A digital cytometry software
by: Rachel A. Aronow, et al.
Published: (2022-06-01)

Comprehensive analysis of immune-related gene signature based on ssGSEA algorithms in the prognosis and immune landscape of hepatocellular carcinoma
by: Liangliang Wang, et al.
Published: (2022-12-01)

Identification of prognosis-related gene features in low-grade glioma based on ssGSEA
by: Yuanzhi He, et al.
Published: (2022-12-01)

Identification of biomarkers associated with CD8+ T cells in rheumatoid arthritis and their pan-cancer analysis
by: Zhenyu Zhao, et al.
Published: (2022-11-01)

Prognostic nomogram based on immune scores for breast cancer patients
by: Ju Wang, et al.
Published: (2019-09-01)