Complete mitochondrial genome of the Loligo japonica
In this study, we determined the complete mitochondrial genome of Loligo japonica. The genome was 17,232 bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 3 main non-coding regions. The overall base composition of L. japonica is A 39.60%, C 18.22%,...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2017-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2017.1361349 |
| _version_ | 1827774398572003328 |
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| author | Lihua Jiang Lisen Kang Changwen Wu |
| author_facet | Lihua Jiang Lisen Kang Changwen Wu |
| author_sort | Lihua Jiang |
| collection | DOAJ |
| description | In this study, we determined the complete mitochondrial genome of Loligo japonica. The genome was 17,232 bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 3 main non-coding regions. The overall base composition of L. japonica is A 39.60%, C 18.22%, T33.38% and G 8.80%, with a highly A + T bias of 72.98%. All of the three control regions (CR) contain termination-associated sequences and conserved sequence blocks. Here, we describe a phylogenetic analysis of 11 species Cephalopoda based on the complete mitochondrial genome, and the result showed that the Loligo Beka and Loligo uyii are most closely related to L. japonica. This mitogenome sequence data would play an important role in the investigation of phylogenetic relationship, taxonomic resolution and phylogeography of the Cephalopoda. |
| first_indexed | 2024-03-11T13:36:48Z |
| format | Article |
| id | doaj.art-e3bbe6523039411e93b2536966c4c9a7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:36:48Z |
| publishDate | 2017-12-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e3bbe6523039411e93b2536966c4c9a72023-11-02T15:42:57ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592017-12-012249349410.1080/23802359.2017.13613491361349Complete mitochondrial genome of the Loligo japonicaLihua Jiang0Lisen Kang1Changwen Wu2Zhejiang Ocean UniversityZhejiang Ocean UniversityZhejiang Ocean UniversityIn this study, we determined the complete mitochondrial genome of Loligo japonica. The genome was 17,232 bp in length and contained 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes and 3 main non-coding regions. The overall base composition of L. japonica is A 39.60%, C 18.22%, T33.38% and G 8.80%, with a highly A + T bias of 72.98%. All of the three control regions (CR) contain termination-associated sequences and conserved sequence blocks. Here, we describe a phylogenetic analysis of 11 species Cephalopoda based on the complete mitochondrial genome, and the result showed that the Loligo Beka and Loligo uyii are most closely related to L. japonica. This mitogenome sequence data would play an important role in the investigation of phylogenetic relationship, taxonomic resolution and phylogeography of the Cephalopoda.http://dx.doi.org/10.1080/23802359.2017.1361349mitochondrial genomeloligo japonicaphylogenetic tree |
| spellingShingle | Lihua Jiang Lisen Kang Changwen Wu Complete mitochondrial genome of the Loligo japonica Mitochondrial DNA. Part B. Resources mitochondrial genome loligo japonica phylogenetic tree |
| title | Complete mitochondrial genome of the Loligo japonica |
| title_full | Complete mitochondrial genome of the Loligo japonica |
| title_fullStr | Complete mitochondrial genome of the Loligo japonica |
| title_full_unstemmed | Complete mitochondrial genome of the Loligo japonica |
| title_short | Complete mitochondrial genome of the Loligo japonica |
| title_sort | complete mitochondrial genome of the loligo japonica |
| topic | mitochondrial genome loligo japonica phylogenetic tree |
| url | http://dx.doi.org/10.1080/23802359.2017.1361349 |
| work_keys_str_mv | AT lihuajiang completemitochondrialgenomeoftheloligojaponica AT lisenkang completemitochondrialgenomeoftheloligojaponica AT changwenwu completemitochondrialgenomeoftheloligojaponica |