An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria
This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the E...
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| Format: | Article |
| Language: | English |
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Elsevier
2018-06-01
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| Series: | Data in Brief |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340918304232 |
| _version_ | 1818032047218753536 |
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| author | A.C.M. Veloo H. Jean-Pierre U.S. Justesen T. Morris E. Urban I. Wybo M. Kostrzewa A.W. Friedrich on behalf of the ENRIA workgroup |
| author_facet | A.C.M. Veloo H. Jean-Pierre U.S. Justesen T. Morris E. Urban I. Wybo M. Kostrzewa A.W. Friedrich on behalf of the ENRIA workgroup |
| author_sort | A.C.M. Veloo |
| collection | DOAJ |
| description | This data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the European Network for the Rapid Identification of Anaerobes (ENRIA) project, using 6309 human clinical anaerobic bacterial strains.Different databases were compared with each other; the db 5989 database (V5 database); the V5 database complimented with Main Spectral Profiles (MSPs) of ENRIA strains added to the next update of the database; and the V5 database complimented with the MSPs of all anaerobic clinical isolates collected within the ENRIA project. For a comprehensive discussion of the full dataset, please see the research article that accompanies this data article (Veloo et al., 2018) [1] |
| first_indexed | 2024-12-10T06:01:09Z |
| format | Article |
| id | doaj.art-e415990da068451ba7ebc5e4a289c77c |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-12-10T06:01:09Z |
| publishDate | 2018-06-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-e415990da068451ba7ebc5e4a289c77c2022-12-22T01:59:49ZengElsevierData in Brief2352-34092018-06-011814841496An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteriaA.C.M. Veloo0H. Jean-Pierre1U.S. Justesen2T. Morris3E. Urban4I. Wybo5M. Kostrzewa6A.W. Friedrich7 on behalf of the ENRIA workgroup8University of Groningen, University Medical Center Groningen, Department of Medical Microbiology, Groningen, The Netherlands; Corresponding author.Centre Hospitalier Universitaire de Montpellier, Hôpital Arnaud de Villeneuve, Laboratoire de Bactériologie, 371 Avenue du Doyen Gaston Giraud, 34295 Montpellier Cedex 5, France; Université Montpellier 1, UMR5119 ECOSYM, Equipe Pathogènes Hydriques Santé Environnements, UMR 5569 Hydrosciences, UFR Pharmacie, 15 avenue Charles Flahault, 34093 Montpellier Cedex 5, FranceDepartment of Clinical Microbiology, Odense University Hospital, Odense, DenmarkUK Anaerobe Reference Unit, Public Health Wales Microbiology, Cardiff, UKInstitute of Clinical Microbiology, University of Szeged, HungaryDepartment of Microbiology and Infection Control, Universitair Ziekenhuis Brussel, Brussels, BelgiumBruker Daltonics, Bremen, GermanyUniversity of Groningen, University Medical Center Groningen, Department of Medical Microbiology, Groningen, The NetherlandsUniversity of Groningen, University Medical Center Groningen, Department of Medical Microbiology, Groningen, The Netherlands; Centre Hospitalier Universitaire de Montpellier, Hôpital Arnaud de Villeneuve, Laboratoire de Bactériologie, 371 Avenue du Doyen Gaston Giraud, 34295 Montpellier Cedex 5, France; Université Montpellier 1, UMR5119 ECOSYM, Equipe Pathogènes Hydriques Santé Environnements, UMR 5569 Hydrosciences, UFR Pharmacie, 15 avenue Charles Flahault, 34093 Montpellier Cedex 5, France; Department of Clinical Microbiology, Odense University Hospital, Odense, Denmark; UK Anaerobe Reference Unit, Public Health Wales Microbiology, Cardiff, UK; Institute of Clinical Microbiology, University of Szeged, Hungary; Department of Microbiology and Infection Control, Universitair Ziekenhuis Brussel, Brussels, Belgium; Bruker Daltonics, Bremen, GermanyThis data in brief article presents the data obtained during the validation of the optimized Biotyper Matrix Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry (MALDI-TOF MS) database. The validation was performed by the different expertise laboratories, collaborating within the European Network for the Rapid Identification of Anaerobes (ENRIA) project, using 6309 human clinical anaerobic bacterial strains.Different databases were compared with each other; the db 5989 database (V5 database); the V5 database complimented with Main Spectral Profiles (MSPs) of ENRIA strains added to the next update of the database; and the V5 database complimented with the MSPs of all anaerobic clinical isolates collected within the ENRIA project. For a comprehensive discussion of the full dataset, please see the research article that accompanies this data article (Veloo et al., 2018) [1]http://www.sciencedirect.com/science/article/pii/S2352340918304232 |
| spellingShingle | A.C.M. Veloo H. Jean-Pierre U.S. Justesen T. Morris E. Urban I. Wybo M. Kostrzewa A.W. Friedrich on behalf of the ENRIA workgroup An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria Data in Brief |
| title | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
| title_full | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
| title_fullStr | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
| title_full_unstemmed | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
| title_short | An overview of the data obtained during the validation of an optimized MALDI-TOF MS Biotyper database for the identification of anaerobic bacteria |
| title_sort | overview of the data obtained during the validation of an optimized maldi tof ms biotyper database for the identification of anaerobic bacteria |
| url | http://www.sciencedirect.com/science/article/pii/S2352340918304232 |
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