A collaborative resource platform for non-human primate neuroimaging

Neuroimaging non-human primates (NHPs) is a growing, yet highly specialized field of neuroscience. Resources that were primarily developed for human neuroimaging often need to be significantly adapted for use with NHPs or other animals, which has led to an abundance of custom, in-house solutions. In...

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Main Authors: Adam Messinger, Nikoloz Sirmpilatze, Katja Heuer, Kep Kee Loh, Rogier B. Mars, Julien Sein, Ting Xu, Daniel Glen, Benjamin Jung, Jakob Seidlitz, Paul Taylor, Roberto Toro, Eduardo A. Garza-Villarreal, Caleb Sponheim, Xindi Wang, R. Austin Benn, Bastien Cagna, Rakshit Dadarwal, Henry C. Evrard, Pamela Garcia-Saldivar, Steven Giavasis, Renée Hartig, Claude Lepage, Cirong Liu, Piotr Majka, Hugo Merchant, Michael P. Milham, Marcello G.P. Rosa, Jordy Tasserie, Lynn Uhrig, Daniel S. Margulies, P. Christiaan Klink
Format: Article
Language:English
Published: Elsevier 2021-02-01
Series:NeuroImage
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S1053811920310041
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author Adam Messinger
Nikoloz Sirmpilatze
Katja Heuer
Kep Kee Loh
Rogier B. Mars
Julien Sein
Ting Xu
Daniel Glen
Benjamin Jung
Jakob Seidlitz
Paul Taylor
Roberto Toro
Eduardo A. Garza-Villarreal
Caleb Sponheim
Xindi Wang
R. Austin Benn
Bastien Cagna
Rakshit Dadarwal
Henry C. Evrard
Pamela Garcia-Saldivar
Steven Giavasis
Renée Hartig
Claude Lepage
Cirong Liu
Piotr Majka
Hugo Merchant
Michael P. Milham
Marcello G.P. Rosa
Jordy Tasserie
Lynn Uhrig
Daniel S. Margulies
P. Christiaan Klink
author_facet Adam Messinger
Nikoloz Sirmpilatze
Katja Heuer
Kep Kee Loh
Rogier B. Mars
Julien Sein
Ting Xu
Daniel Glen
Benjamin Jung
Jakob Seidlitz
Paul Taylor
Roberto Toro
Eduardo A. Garza-Villarreal
Caleb Sponheim
Xindi Wang
R. Austin Benn
Bastien Cagna
Rakshit Dadarwal
Henry C. Evrard
Pamela Garcia-Saldivar
Steven Giavasis
Renée Hartig
Claude Lepage
Cirong Liu
Piotr Majka
Hugo Merchant
Michael P. Milham
Marcello G.P. Rosa
Jordy Tasserie
Lynn Uhrig
Daniel S. Margulies
P. Christiaan Klink
author_sort Adam Messinger
collection DOAJ
description Neuroimaging non-human primates (NHPs) is a growing, yet highly specialized field of neuroscience. Resources that were primarily developed for human neuroimaging often need to be significantly adapted for use with NHPs or other animals, which has led to an abundance of custom, in-house solutions. In recent years, the global NHP neuroimaging community has made significant efforts to transform the field towards more open and collaborative practices. Here we present the PRIMatE Resource Exchange (PRIME-RE), a new collaborative online platform for NHP neuroimaging. PRIME-RE is a dynamic community-driven hub for the exchange of practical knowledge, specialized analytical tools, and open data repositories, specifically related to NHP neuroimaging. PRIME-RE caters to both researchers and developers who are either new to the field, looking to stay abreast of the latest developments, or seeking to collaboratively advance the field .
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spelling doaj.art-e462c7c14ea84b8eb60a6b0b3e2cb3ca2022-12-21T17:13:12ZengElsevierNeuroImage1095-95722021-02-01226117519A collaborative resource platform for non-human primate neuroimagingAdam Messinger0Nikoloz Sirmpilatze1Katja Heuer2Kep Kee Loh3Rogier B. Mars4Julien Sein5Ting Xu6Daniel Glen7Benjamin Jung8Jakob Seidlitz9Paul Taylor10Roberto Toro11Eduardo A. Garza-Villarreal12Caleb Sponheim13Xindi Wang14R. Austin Benn15Bastien Cagna16Rakshit Dadarwal17Henry C. Evrard18Pamela Garcia-Saldivar19Steven Giavasis20Renée Hartig21Claude Lepage22Cirong Liu23Piotr Majka24Hugo Merchant25Michael P. Milham26Marcello G.P. Rosa27Jordy Tasserie28Lynn Uhrig29Daniel S. Margulies30P. Christiaan Klink31Laboratory of Brain and Cognition, National Institute of Mental Health, Bethesda, USAGerman Primate Center – Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany; Georg-August-University Göttingen, 37073 Göttingen, GermanyMax Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany; Center for Research and Interdisciplinarity (CRI), INSERM U1284, Université de Paris, Paris, FranceInstitut de Neurosciences de la Timone (INT), Aix-Marseille Université, CNRS, UMR 7289, 13005 Marseille, France; Institute for Language, Communication, and the Brain, Aix-Marseille University, Marseille, FranceWellcome Centre for Integrative Neuroimaging, Nuffield Department of Clinical Neurosciences, John Radcliffe Hospital, University of Oxford, Oxford OX3 9DU, UK; Donders Institute for Brain, Cognition, and Behaviour, Radboud University Nijmegen, Montessorilaan 3, 6525 HR Nijmegen, The NetherlandsInstitut de Neurosciences de la Timone (INT), Aix-Marseille Université, CNRS, UMR 7289, 13005 Marseille, FranceChild Mind Institute, 101 E 56th St, New York, NY 10022, USAScientific and Statistical Computing Core, National Institute of Mental Health, Bethesda, USALaboratory of Brain and Cognition, National Institute of Mental Health, Bethesda, USA; Department of Neuroscience, Brown University, Providence RI USADepartment of Child and Adolescent Psychiatry and Behavioral Science, Children's Hospital of Philadelphia, Philadelphia PA USA; Department of Psychiatry, University of Pennsylvania, Philadelphia PA USAScientific and Statistical Computing Core, National Institute of Mental Health, Bethesda, USACenter for Research and Interdisciplinarity (CRI), INSERM U1284, Université de Paris, Paris, France; Department of Neuroscience, Institut Pasteur, UMR 3571 CNRS, Université de Paris, Paris, FranceInstituto de Neurobiologia, Universidad Nacional Autónoma de México campus Juriquilla, Queretaro, MexicoDepartment of Organismal Biology and Anatomy, University of Chicago, Chicago IL USAMcGill Centre for Integrative Neuroscience, Montreal Neurological Institute (MNI), Quebec, CanadaCentro Nacional de Investigaciones Cardiovasculares Carlos III (CNIC), Madrid, SpainInstitut de Neurosciences de la Timone (INT), Aix-Marseille Université, CNRS, UMR 7289, 13005 Marseille, FranceGerman Primate Center – Leibniz Institute for Primate Research, Kellnerweg 4, 37077 Göttingen, Germany; Georg-August-University Göttingen, 37073 Göttingen, GermanyCentre for Integrative Neurosciences, University of Tübingen, Tübingen, Germany; Max Planck Institute for Biological Cybernetics, Tübingen, Germany; Nathan S. Kline Institute for Psychiatric Research, Orangeburg, New York, USA; International Center for Primate Brain Research, Chinese Academy of Science, Shanghai, PRCInstituto de Neurobiologia, Universidad Nacional Autónoma de México campus Juriquilla, Queretaro, MexicoChild Mind Institute, 101 E 56th St, New York, NY 10022, USACentre for Integrative Neurosciences, University of Tübingen, Tübingen, Germany; Max Planck Institute for Biological Cybernetics, Tübingen, Germany; Focus Program Translational Neurosciences, University Medical Center, Mainz, GermanyMcGill Centre for Integrative Neuroscience, Montreal Neurological Institute (MNI), Quebec, CanadaDepartment of Neurobiology, University of Pittsburgh Brain Institute, Pittsburgh PA, USALaboratory of Neuroinformatics, Nencki Institute of Experimental Biology of the Polish Academy of Sciences, 02-093 Warsaw, Poland; Australian Research Council, Centre of Excellence for Integrative Brain Function, Monash University Node, Clayton, VIC 3800, Australia; Biomedicine Discovery Institute and Department of Physiology, Monash University, Clayton, VIC 3800, AustraliaInstituto de Neurobiologia, Universidad Nacional Autónoma de México campus Juriquilla, Queretaro, MexicoChild Mind Institute, 101 E 56th St, New York, NY 10022, USA; Nathan S. Kline Institute for Psychiatric Research, Orangeburg, New York, USAAustralian Research Council, Centre of Excellence for Integrative Brain Function, Monash University Node, Clayton, VIC 3800, Australia; Biomedicine Discovery Institute and Department of Physiology, Monash University, Clayton, VIC 3800, AustraliaCommissariat à l'Énergie Atomique et aux Énergies Alternatives, Direction de la Recherche Fondamentale, NeuroSpin Center, Gif-sur-Yvette, France; Cognitive Neuroimaging Unit, Institut National de la Santé et de la Recherche Médicale U992, Gif-sur-Yvette, France; Université Paris-Saclay, FranceCommissariat à l'Énergie Atomique et aux Énergies Alternatives, Direction de la Recherche Fondamentale, NeuroSpin Center, Gif-sur-Yvette, France; Cognitive Neuroimaging Unit, Institut National de la Santé et de la Recherche Médicale U992, Gif-sur-Yvette, FranceIntegrative Neuroscience and Cognition Center, Centre National de la Recherche Scientifique (CNRS) UMR 8002, Paris, FranceDepartment of Vision & Cognition, Netherlands Institute for Neuroscience, Amsterdam, The Netherlands; Corresponding author.Neuroimaging non-human primates (NHPs) is a growing, yet highly specialized field of neuroscience. Resources that were primarily developed for human neuroimaging often need to be significantly adapted for use with NHPs or other animals, which has led to an abundance of custom, in-house solutions. In recent years, the global NHP neuroimaging community has made significant efforts to transform the field towards more open and collaborative practices. Here we present the PRIMatE Resource Exchange (PRIME-RE), a new collaborative online platform for NHP neuroimaging. PRIME-RE is a dynamic community-driven hub for the exchange of practical knowledge, specialized analytical tools, and open data repositories, specifically related to NHP neuroimaging. PRIME-RE caters to both researchers and developers who are either new to the field, looking to stay abreast of the latest developments, or seeking to collaboratively advance the field .http://www.sciencedirect.com/science/article/pii/S1053811920310041Open scienceResource sharingToolboxPipelineStructuralFunctional
spellingShingle Adam Messinger
Nikoloz Sirmpilatze
Katja Heuer
Kep Kee Loh
Rogier B. Mars
Julien Sein
Ting Xu
Daniel Glen
Benjamin Jung
Jakob Seidlitz
Paul Taylor
Roberto Toro
Eduardo A. Garza-Villarreal
Caleb Sponheim
Xindi Wang
R. Austin Benn
Bastien Cagna
Rakshit Dadarwal
Henry C. Evrard
Pamela Garcia-Saldivar
Steven Giavasis
Renée Hartig
Claude Lepage
Cirong Liu
Piotr Majka
Hugo Merchant
Michael P. Milham
Marcello G.P. Rosa
Jordy Tasserie
Lynn Uhrig
Daniel S. Margulies
P. Christiaan Klink
A collaborative resource platform for non-human primate neuroimaging
NeuroImage
Open science
Resource sharing
Toolbox
Pipeline
Structural
Functional
title A collaborative resource platform for non-human primate neuroimaging
title_full A collaborative resource platform for non-human primate neuroimaging
title_fullStr A collaborative resource platform for non-human primate neuroimaging
title_full_unstemmed A collaborative resource platform for non-human primate neuroimaging
title_short A collaborative resource platform for non-human primate neuroimaging
title_sort collaborative resource platform for non human primate neuroimaging
topic Open science
Resource sharing
Toolbox
Pipeline
Structural
Functional
url http://www.sciencedirect.com/science/article/pii/S1053811920310041
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