Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae)
Corylopsis microcarpa H.T. Chang 1960 is a relict species from China. The chloroplast genome of C. microcarpa is 159,438 bp in size and shows typical quadripartite structure, which includes a pair of inverted repeat regions (26,280 bp), a large single-copy region (88,185 bp), and a small single-copy...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2152643 |
| _version_ | 1797638538858070016 |
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| author | Jinsen Lu Kai Xu Xiaohong Qiu Mu Liu |
| author_facet | Jinsen Lu Kai Xu Xiaohong Qiu Mu Liu |
| author_sort | Jinsen Lu |
| collection | DOAJ |
| description | Corylopsis microcarpa H.T. Chang 1960 is a relict species from China. The chloroplast genome of C. microcarpa is 159,438 bp in size and shows typical quadripartite structure, which includes a pair of inverted repeat regions (26,280 bp), a large single-copy region (88,185 bp), and a small single-copy region (18,693 bp). The whole chloroplast genome encodes 114 unique genes, including 80 protein-code genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Ninety-one SSRs were identified. The phylogenetic analysis revealed C. microcarpa diverged early in Corylopsis. |
| first_indexed | 2024-03-11T13:05:03Z |
| format | Article |
| id | doaj.art-e48f4d342f9847289a30ad492d9d19f7 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:03Z |
| publishDate | 2022-12-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e48f4d342f9847289a30ad492d9d19f72023-11-03T14:44:06ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-12-017122067206910.1080/23802359.2022.21526432152643Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae)Jinsen Lu0Kai Xu1Xiaohong Qiu2Mu Liu3College of Landscape Architecture and Arts, Jiangxi Agricultural UniversityCollege of Forestry, Jiangxi Agricultural UniversityGarden Bureau of Yushan CountyCollege of Landscape Architecture and Arts, Jiangxi Agricultural UniversityCorylopsis microcarpa H.T. Chang 1960 is a relict species from China. The chloroplast genome of C. microcarpa is 159,438 bp in size and shows typical quadripartite structure, which includes a pair of inverted repeat regions (26,280 bp), a large single-copy region (88,185 bp), and a small single-copy region (18,693 bp). The whole chloroplast genome encodes 114 unique genes, including 80 protein-code genes, 30 transfer RNA (tRNA) genes, and four ribosomal RNA (rRNA) genes. Ninety-one SSRs were identified. The phylogenetic analysis revealed C. microcarpa diverged early in Corylopsis.http://dx.doi.org/10.1080/23802359.2022.2152643corylopsis microcarpaendemic speciesphylogenetic relationshipchloroplast genome |
| spellingShingle | Jinsen Lu Kai Xu Xiaohong Qiu Mu Liu Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae) Mitochondrial DNA. Part B. Resources corylopsis microcarpa endemic species phylogenetic relationship chloroplast genome |
| title | Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae) |
| title_full | Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae) |
| title_fullStr | Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae) |
| title_full_unstemmed | Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae) |
| title_short | Chloroplast genome characteristics of Corylopsis microcarpa H.T. Chang (Hamamelidaceae) |
| title_sort | chloroplast genome characteristics of corylopsis microcarpa h t chang hamamelidaceae |
| topic | corylopsis microcarpa endemic species phylogenetic relationship chloroplast genome |
| url | http://dx.doi.org/10.1080/23802359.2022.2152643 |
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