The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration
The complete mitochondrial genome of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) was completely sequenced by high throughput sequencing method. The complete mitochondrial genome was 16,552 bp in length, consisted of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, a putative contr...
| Main Authors: | , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2018-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1532337 |
| _version_ | 1797640647904067584 |
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| author | Min Yang Wei Shi Hui Yu |
| author_facet | Min Yang Wei Shi Hui Yu |
| author_sort | Min Yang |
| collection | DOAJ |
| description | The complete mitochondrial genome of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) was completely sequenced by high throughput sequencing method. The complete mitochondrial genome was 16,552 bp in length, consisted of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, a putative control region (CR), and an origin of replication on the light-strand (OL). The base composition values for the mitochondrial genome were 29.1%, 27.6%, 15.7%, and 27.6% for A, C, G, and T, respectively. The gene arrangement is identical to those in typical fishes. Phylogenetic tree based on 13 protein-coding genes shows that P. microcephalus has a close phylogenetic relationship with genus Trypauchen and belongs to Oxudercidae. |
| first_indexed | 2024-03-11T13:34:52Z |
| format | Article |
| id | doaj.art-e532afa2a89f45cead9d668c58ddd58b |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:34:52Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e532afa2a89f45cead9d668c58ddd58b2023-11-02T15:57:27ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-01321230123210.1080/23802359.2018.15323371532337The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic considerationMin Yang0Wei Shi1Hui Yu2CAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of SciencesCAS Key Laboratory of Tropical Marine Bio-resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of SciencesCollege of Life Science, Foshan UniversityThe complete mitochondrial genome of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) was completely sequenced by high throughput sequencing method. The complete mitochondrial genome was 16,552 bp in length, consisted of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, a putative control region (CR), and an origin of replication on the light-strand (OL). The base composition values for the mitochondrial genome were 29.1%, 27.6%, 15.7%, and 27.6% for A, C, G, and T, respectively. The gene arrangement is identical to those in typical fishes. Phylogenetic tree based on 13 protein-coding genes shows that P. microcephalus has a close phylogenetic relationship with genus Trypauchen and belongs to Oxudercidae.http://dx.doi.org/10.1080/23802359.2018.1532337paratrypauchen microcephaluscomplete mitochondrial genomephylogenetic relationship |
| spellingShingle | Min Yang Wei Shi Hui Yu The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration Mitochondrial DNA. Part B. Resources paratrypauchen microcephalus complete mitochondrial genome phylogenetic relationship |
| title | The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration |
| title_full | The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration |
| title_fullStr | The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration |
| title_full_unstemmed | The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration |
| title_short | The complete mitochondrial genome characterization of Paratrypauchen microcephalus (Gobiiformes: Oxudercidae) and phylogenetic consideration |
| title_sort | complete mitochondrial genome characterization of paratrypauchen microcephalus gobiiformes oxudercidae and phylogenetic consideration |
| topic | paratrypauchen microcephalus complete mitochondrial genome phylogenetic relationship |
| url | http://dx.doi.org/10.1080/23802359.2018.1532337 |
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