The complete chloroplast genome sequence of Ardisia crispa Thunb.
Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throug...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2022-12-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2022.2154621 |
| _version_ | 1797638539292180480 |
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| author | Song Guo Zeyang Li Yu Liu Wuwei Wu |
| author_facet | Song Guo Zeyang Li Yu Liu Wuwei Wu |
| author_sort | Song Guo |
| collection | DOAJ |
| description | Ardisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throughput sequencing approach. The total length of the chloroplast genome is 156,709 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and a pair of inverted repeats IRa and IRb regions which are separated by the LSC and SSC, with lengths of 86,301 bp, 18,411 bp, and 25,999 bp, respectively. In general, 132 genes were identified, including 93 protein-coding genes, 31 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The overall GC content is 47.82%. Phylogenetic analysis revealed that A. crispa is close to congeneric species A. mamillata. |
| first_indexed | 2024-03-11T13:05:03Z |
| format | Article |
| id | doaj.art-e546dcfbcb8e4fc380d23336bf6ff397 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:05:03Z |
| publishDate | 2022-12-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e546dcfbcb8e4fc380d23336bf6ff3972023-11-03T14:44:06ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-12-017122070207210.1080/23802359.2022.21546212154621The complete chloroplast genome sequence of Ardisia crispa Thunb.Song Guo0Zeyang Li1Yu Liu2Wuwei Wu3Key lab for Zhuang and Yao Pharmaceutical Quality Biology, College of Food and Biochemical Engineering, Guangxi Science and Technology Normal UniversityKey lab for Zhuang and Yao Pharmaceutical Quality Biology, College of Food and Biochemical Engineering, Guangxi Science and Technology Normal UniversityGuangxi Botanical Garden of Medicinal PlantsGuangxi Botanical Garden of Medicinal PlantsArdisia crispa (Thunb.) A. DC. belongs to the genus Ardisia (Myrsinaceae). It is a traditional medicinal plant widely used to treat inflammatory-related diseases in southern China. Here, we provide the complete chloroplast genome of A. crispa from Laibin, Guangxi, PR China using Illumina high-throughput sequencing approach. The total length of the chloroplast genome is 156,709 bp, including a large single-copy (LSC) region, a small single-copy (SSC) region, and a pair of inverted repeats IRa and IRb regions which are separated by the LSC and SSC, with lengths of 86,301 bp, 18,411 bp, and 25,999 bp, respectively. In general, 132 genes were identified, including 93 protein-coding genes, 31 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The overall GC content is 47.82%. Phylogenetic analysis revealed that A. crispa is close to congeneric species A. mamillata.http://dx.doi.org/10.1080/23802359.2022.2154621chloroplast genomeardisia crispa (thunb.) a. dcphylogenetic analysis |
| spellingShingle | Song Guo Zeyang Li Yu Liu Wuwei Wu The complete chloroplast genome sequence of Ardisia crispa Thunb. Mitochondrial DNA. Part B. Resources chloroplast genome ardisia crispa (thunb.) a. dc phylogenetic analysis |
| title | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
| title_full | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
| title_fullStr | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
| title_full_unstemmed | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
| title_short | The complete chloroplast genome sequence of Ardisia crispa Thunb. |
| title_sort | complete chloroplast genome sequence of ardisia crispa thunb |
| topic | chloroplast genome ardisia crispa (thunb.) a. dc phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2022.2154621 |
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