Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii
Bacterial endophytes play a vital role in the growth and fitness of host plants from infection by phytopathogens. To our knowledge, however, little information is available on the endophytic bacterial composition in healthy and diseased Kappahycus alvarezii, one of the most important major sources o...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Elsevier
2023-12-01
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| Series: | Data in Brief |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2352340923008491 |
| _version_ | 1797430015333236736 |
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| author | Vernon Vest Mangun Rajeena Sugumaran Wilson Thau Lym Yong Nur Athirah Yusof |
| author_facet | Vernon Vest Mangun Rajeena Sugumaran Wilson Thau Lym Yong Nur Athirah Yusof |
| author_sort | Vernon Vest Mangun |
| collection | DOAJ |
| description | Bacterial endophytes play a vital role in the growth and fitness of host plants from infection by phytopathogens. To our knowledge, however, little information is available on the endophytic bacterial composition in healthy and diseased Kappahycus alvarezii, one of the most important major sources of carrageenan industries, especially in Sabah. The main idea was to analyze and compare the composition of endophytic bacterial communities in healthy and diseased K. alvarezii isolated from Sabah, Malaysia. The data reveals the composition of endophytic bacterial microbiomes in healthy and diseased K. alvarezii isolated from Sabah. The isolated endophytes were identified using 16S rDNA sequencing. Taxonomic identification and phylogenetic tree analysis were done using the online BLAST (blastn) and MEGA11 software, respectively. The data presents the diversity of bacterial endosphere microbiomes found in healthy K. alvarezii which are composed of Bacillus, Cytobacillus and Priestia whereas Vibrio and Micrococcus occurred exclusively in the diseased K. alvarezii. Microbial comparative analysis between the healthy and diseased seaweed points to the potential of several Bacillus strains that may have biocontrol potential against Vibrio infection in seaweed such as the ice-ice disease. Raw data files are available at the GenBank, NCBI database under the accession number MZ570560 to MZ570580. |
| first_indexed | 2024-03-09T09:21:37Z |
| format | Article |
| id | doaj.art-e58803448c9e477bbbee20287e6ea547 |
| institution | Directory Open Access Journal |
| issn | 2352-3409 |
| language | English |
| last_indexed | 2024-03-09T09:21:37Z |
| publishDate | 2023-12-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Data in Brief |
| spelling | doaj.art-e58803448c9e477bbbee20287e6ea5472023-12-02T07:00:26ZengElsevierData in Brief2352-34092023-12-0151109785Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvareziiVernon Vest Mangun0Rajeena Sugumaran1Wilson Thau Lym Yong2Nur Athirah Yusof3Biotechnology Research Institute, Universiti Malaysia Sabah, Jalan UMS, Kota Kinabalu, Sabah 88400, MalaysiaBiotechnology Research Institute, Universiti Malaysia Sabah, Jalan UMS, Kota Kinabalu, Sabah 88400, MalaysiaBiotechnology Research Institute, Universiti Malaysia Sabah, Jalan UMS, Kota Kinabalu, Sabah 88400, MalaysiaCorresponding author.; Biotechnology Research Institute, Universiti Malaysia Sabah, Jalan UMS, Kota Kinabalu, Sabah 88400, MalaysiaBacterial endophytes play a vital role in the growth and fitness of host plants from infection by phytopathogens. To our knowledge, however, little information is available on the endophytic bacterial composition in healthy and diseased Kappahycus alvarezii, one of the most important major sources of carrageenan industries, especially in Sabah. The main idea was to analyze and compare the composition of endophytic bacterial communities in healthy and diseased K. alvarezii isolated from Sabah, Malaysia. The data reveals the composition of endophytic bacterial microbiomes in healthy and diseased K. alvarezii isolated from Sabah. The isolated endophytes were identified using 16S rDNA sequencing. Taxonomic identification and phylogenetic tree analysis were done using the online BLAST (blastn) and MEGA11 software, respectively. The data presents the diversity of bacterial endosphere microbiomes found in healthy K. alvarezii which are composed of Bacillus, Cytobacillus and Priestia whereas Vibrio and Micrococcus occurred exclusively in the diseased K. alvarezii. Microbial comparative analysis between the healthy and diseased seaweed points to the potential of several Bacillus strains that may have biocontrol potential against Vibrio infection in seaweed such as the ice-ice disease. Raw data files are available at the GenBank, NCBI database under the accession number MZ570560 to MZ570580.http://www.sciencedirect.com/science/article/pii/S2352340923008491MacroalgaeSabah seaweedEndophytic bacteria16S rDNAKappaphycus alvareziiSeaweed disease |
| spellingShingle | Vernon Vest Mangun Rajeena Sugumaran Wilson Thau Lym Yong Nur Athirah Yusof Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii Data in Brief Macroalgae Sabah seaweed Endophytic bacteria 16S rDNA Kappaphycus alvarezii Seaweed disease |
| title | Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii |
| title_full | Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii |
| title_fullStr | Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii |
| title_full_unstemmed | Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii |
| title_short | Dataset of 16S ribosomal DNA sequence-based identification of endophytic bacteria isolated from healthy and diseased Sabah red algae, Kappaphycus alvarezii |
| title_sort | dataset of 16s ribosomal dna sequence based identification of endophytic bacteria isolated from healthy and diseased sabah red algae kappaphycus alvarezii |
| topic | Macroalgae Sabah seaweed Endophytic bacteria 16S rDNA Kappaphycus alvarezii Seaweed disease |
| url | http://www.sciencedirect.com/science/article/pii/S2352340923008491 |
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