Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19

Abstract Background Studies quantifying SARS-CoV-2 have focused on upper respiratory tract or plasma viral RNA with inconsistent association with clinical outcomes. The association between plasma viral antigen levels and clinical outcomes has not been previously studied. Our aim was to investigate t...

Full description

Bibliographic Details
Main Authors: Katherine D. Wick, Aleksandra Leligdowicz, Andrew Willmore, Sidney A. Carrillo, Rajani Ghale, Alejandra Jauregui, Suzanna S. Chak, Viet Nguyen, Deanna Lee, Chayse Jones, Robin Dewar, H. Clifford Lane, Kirsten N. Kangelaris, Carolyn M. Hendrickson, Kathleen D. Liu, Pratik Sinha, David J. Erle, Charles R. Langelier, Matthew F. Krummell, Prescott G. Woodruff, Carolyn S. Calfee, Michael A. Matthay, the COMET Consortium
Format: Article
Language:English
Published: BMC 2022-09-01
Series:Critical Care
Online Access:https://doi.org/10.1186/s13054-022-04153-3
_version_ 1828110825773072384
author Katherine D. Wick
Aleksandra Leligdowicz
Andrew Willmore
Sidney A. Carrillo
Rajani Ghale
Alejandra Jauregui
Suzanna S. Chak
Viet Nguyen
Deanna Lee
Chayse Jones
Robin Dewar
H. Clifford Lane
Kirsten N. Kangelaris
Carolyn M. Hendrickson
Kathleen D. Liu
Pratik Sinha
David J. Erle
Charles R. Langelier
Matthew F. Krummell
Prescott G. Woodruff
Carolyn S. Calfee
Michael A. Matthay
the COMET Consortium
author_facet Katherine D. Wick
Aleksandra Leligdowicz
Andrew Willmore
Sidney A. Carrillo
Rajani Ghale
Alejandra Jauregui
Suzanna S. Chak
Viet Nguyen
Deanna Lee
Chayse Jones
Robin Dewar
H. Clifford Lane
Kirsten N. Kangelaris
Carolyn M. Hendrickson
Kathleen D. Liu
Pratik Sinha
David J. Erle
Charles R. Langelier
Matthew F. Krummell
Prescott G. Woodruff
Carolyn S. Calfee
Michael A. Matthay
the COMET Consortium
author_sort Katherine D. Wick
collection DOAJ
description Abstract Background Studies quantifying SARS-CoV-2 have focused on upper respiratory tract or plasma viral RNA with inconsistent association with clinical outcomes. The association between plasma viral antigen levels and clinical outcomes has not been previously studied. Our aim was to investigate the relationship between plasma SARS-CoV-2 nucleocapsid antigen (N-antigen) concentration and both markers of host response and clinical outcomes. Methods SARS-CoV-2 N-antigen concentrations were measured in the first study plasma sample (D0), collected within 72 h of hospital admission, from 256 subjects admitted between March 2020 and August 2021 in a prospective observational cohort of hospitalized patients with COVID-19. The rank correlations between plasma N-antigen and plasma biomarkers of tissue damage, coagulation, and inflammation were assessed. Multiple ordinal regression was used to test the association between enrollment N-antigen plasma concentration and the primary outcome of clinical deterioration at one week as measured by a modified World Health Organization (WHO) ordinal scale. Multiple logistic regression was used to test the association between enrollment plasma N-antigen concentration and the secondary outcomes of ICU admission, mechanical ventilation at 28 days, and death at 28 days. The prognostic discrimination of an externally derived “high antigen” cutoff of N-antigen ≥ 1000 pg/mL was also tested. Results N-antigen on D0 was detectable in 84% of study participants. Plasma N-antigen levels significantly correlated with RAGE (r = 0.61), IL-10 (r = 0.59), and IP-10 (r = 0.59, adjusted p = 0.01 for all correlations). For the primary outcome of clinical status at one week, each 500 pg/mL increase in plasma N-antigen level was associated with an adjusted OR of 1.05 (95% CI 1.03–1.08) for worse WHO ordinal status. D0 plasma N-antigen ≥ 1000 pg/mL was 77% sensitive and 59% specific (AUROC 0.68) with a positive predictive value of 23% and a negative predictive value of 93% for a worse WHO ordinal scale at day 7 compared to baseline. D0 N-antigen concentration was independently associated with ICU admission and 28-day mechanical ventilation, but not with death at 28 days. Conclusions Plasma N-antigen levels are readily measured and provide important insight into the pathogenesis and prognosis of COVID-19. The measurement of N-antigen levels early in-hospital course may improve risk stratification, especially for identifying patients who are unlikely to progress to severe disease.
first_indexed 2024-04-11T11:25:23Z
format Article
id doaj.art-e599ea26c99e4e01a0e78f4b33fff553
institution Directory Open Access Journal
issn 1364-8535
language English
last_indexed 2024-04-11T11:25:23Z
publishDate 2022-09-01
publisher BMC
record_format Article
series Critical Care
spelling doaj.art-e599ea26c99e4e01a0e78f4b33fff5532022-12-22T04:26:20ZengBMCCritical Care1364-85352022-09-0126111110.1186/s13054-022-04153-3Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19Katherine D. Wick0Aleksandra Leligdowicz1Andrew Willmore2Sidney A. Carrillo3Rajani Ghale4Alejandra Jauregui5Suzanna S. Chak6Viet Nguyen7Deanna Lee8Chayse Jones9Robin Dewar10H. Clifford Lane11Kirsten N. Kangelaris12Carolyn M. Hendrickson13Kathleen D. Liu14Pratik Sinha15David J. Erle16Charles R. Langelier17Matthew F. Krummell18Prescott G. Woodruff19Carolyn S. Calfee20Michael A. Matthay21the COMET ConsortiumCardiovascular Research Institute, University of California San FranciscoCardiovascular Research Institute, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California San FranciscoCardiovascular Research Institute, University of California San FranciscoCardiovascular Research Institute, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, University of California San FranciscoVirus Isolation and Serology Laboratory, Applied and Developmental Directorate, Frederick National LaboratoryDivision of Clinical Research, National Institute of Allergy and Infectious Diseases, National Institutes of HealthDepartment of Hospital Medicine, University of California San FranciscoDivision of Pulmonary and Critical Care Medicine, Department of Medicine, Zuckerberg San Francisco General Hospital and Trauma Center, University of California San FranciscoDivision of Nephrology, Department of Medicine, University of California San Francisco School of MedicineDepartment of Anesthesia, Division of Critical Care, Washington UniversityCardiovascular Research Institute, University of California San FranciscoDivision of Infectious Diseases, University of California San FranciscoImmunoX Initiative, University of California San FranciscoCardiovascular Research Institute, University of California San FranciscoCardiovascular Research Institute, University of California San FranciscoCardiovascular Research Institute, University of California San FranciscoAbstract Background Studies quantifying SARS-CoV-2 have focused on upper respiratory tract or plasma viral RNA with inconsistent association with clinical outcomes. The association between plasma viral antigen levels and clinical outcomes has not been previously studied. Our aim was to investigate the relationship between plasma SARS-CoV-2 nucleocapsid antigen (N-antigen) concentration and both markers of host response and clinical outcomes. Methods SARS-CoV-2 N-antigen concentrations were measured in the first study plasma sample (D0), collected within 72 h of hospital admission, from 256 subjects admitted between March 2020 and August 2021 in a prospective observational cohort of hospitalized patients with COVID-19. The rank correlations between plasma N-antigen and plasma biomarkers of tissue damage, coagulation, and inflammation were assessed. Multiple ordinal regression was used to test the association between enrollment N-antigen plasma concentration and the primary outcome of clinical deterioration at one week as measured by a modified World Health Organization (WHO) ordinal scale. Multiple logistic regression was used to test the association between enrollment plasma N-antigen concentration and the secondary outcomes of ICU admission, mechanical ventilation at 28 days, and death at 28 days. The prognostic discrimination of an externally derived “high antigen” cutoff of N-antigen ≥ 1000 pg/mL was also tested. Results N-antigen on D0 was detectable in 84% of study participants. Plasma N-antigen levels significantly correlated with RAGE (r = 0.61), IL-10 (r = 0.59), and IP-10 (r = 0.59, adjusted p = 0.01 for all correlations). For the primary outcome of clinical status at one week, each 500 pg/mL increase in plasma N-antigen level was associated with an adjusted OR of 1.05 (95% CI 1.03–1.08) for worse WHO ordinal status. D0 plasma N-antigen ≥ 1000 pg/mL was 77% sensitive and 59% specific (AUROC 0.68) with a positive predictive value of 23% and a negative predictive value of 93% for a worse WHO ordinal scale at day 7 compared to baseline. D0 N-antigen concentration was independently associated with ICU admission and 28-day mechanical ventilation, but not with death at 28 days. Conclusions Plasma N-antigen levels are readily measured and provide important insight into the pathogenesis and prognosis of COVID-19. The measurement of N-antigen levels early in-hospital course may improve risk stratification, especially for identifying patients who are unlikely to progress to severe disease.https://doi.org/10.1186/s13054-022-04153-3
spellingShingle Katherine D. Wick
Aleksandra Leligdowicz
Andrew Willmore
Sidney A. Carrillo
Rajani Ghale
Alejandra Jauregui
Suzanna S. Chak
Viet Nguyen
Deanna Lee
Chayse Jones
Robin Dewar
H. Clifford Lane
Kirsten N. Kangelaris
Carolyn M. Hendrickson
Kathleen D. Liu
Pratik Sinha
David J. Erle
Charles R. Langelier
Matthew F. Krummell
Prescott G. Woodruff
Carolyn S. Calfee
Michael A. Matthay
the COMET Consortium
Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
Critical Care
title Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
title_full Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
title_fullStr Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
title_full_unstemmed Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
title_short Plasma SARS-CoV-2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized COVID-19
title_sort plasma sars cov 2 nucleocapsid antigen levels are associated with progression to severe disease in hospitalized covid 19
url https://doi.org/10.1186/s13054-022-04153-3
work_keys_str_mv AT katherinedwick plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT aleksandraleligdowicz plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT andrewwillmore plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT sidneyacarrillo plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT rajanighale plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT alejandrajauregui plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT suzannaschak plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT vietnguyen plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT deannalee plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT chaysejones plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT robindewar plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT hcliffordlane plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT kirstennkangelaris plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT carolynmhendrickson plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT kathleendliu plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT pratiksinha plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT davidjerle plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT charlesrlangelier plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT matthewfkrummell plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT prescottgwoodruff plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT carolynscalfee plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT michaelamatthay plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19
AT thecometconsortium plasmasarscov2nucleocapsidantigenlevelsareassociatedwithprogressiontoseverediseaseinhospitalizedcovid19