Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China
Handeliodendron bodinieri (Sapindaceae) is an endangered monotypic species endemic to the karst forests in southwest China whose populations are now fragmented and the total number of individuals evidently decreased. In this research, we characterized the chloroplast (cp) genome of H. bodinieri usin...
| Main Authors: | , , , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2019-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2019.1671251 |
| _version_ | 1797639678974754816 |
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| author | Xinmin Tian Xueli Li Haoyu Miao Chunlin Xue Bolun Wang Yu Guo Gucheng Zhang |
| author_facet | Xinmin Tian Xueli Li Haoyu Miao Chunlin Xue Bolun Wang Yu Guo Gucheng Zhang |
| author_sort | Xinmin Tian |
| collection | DOAJ |
| description | Handeliodendron bodinieri (Sapindaceae) is an endangered monotypic species endemic to the karst forests in southwest China whose populations are now fragmented and the total number of individuals evidently decreased. In this research, we characterized the chloroplast (cp) genome of H. bodinieri using genome skimming. The whole cp genome was 155,291 bp long and comprised 137 genes, including 8 unique rRNAs, 40 tRNAs, and 89 protein-coding genes. The overall guanine-cytosine content of H. bodinieri cp genome was 37.8%. The phylogenetic analysis suggested that H. bodinieri is closely related to the genus Mangifera. This study will be useful for future studies on conservation genetics of this economically important endemic plant. |
| first_indexed | 2024-03-11T13:21:01Z |
| format | Article |
| id | doaj.art-e5c75aa9d8224ecb8e71e93cd2945295 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:21:01Z |
| publishDate | 2019-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e5c75aa9d8224ecb8e71e93cd29452952023-11-03T10:28:39ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592019-07-01423272327310.1080/23802359.2019.16712511671251Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest ChinaXinmin Tian0Xueli Li1Haoyu Miao2Chunlin Xue3Bolun Wang4Yu Guo5Gucheng Zhang6Xinjiang UniversityXinjiang UniversityXinjiang UniversityXinjiang UniversityXinjiang UniversityXinjiang UniversityHainan Geological Survey InstituteHandeliodendron bodinieri (Sapindaceae) is an endangered monotypic species endemic to the karst forests in southwest China whose populations are now fragmented and the total number of individuals evidently decreased. In this research, we characterized the chloroplast (cp) genome of H. bodinieri using genome skimming. The whole cp genome was 155,291 bp long and comprised 137 genes, including 8 unique rRNAs, 40 tRNAs, and 89 protein-coding genes. The overall guanine-cytosine content of H. bodinieri cp genome was 37.8%. The phylogenetic analysis suggested that H. bodinieri is closely related to the genus Mangifera. This study will be useful for future studies on conservation genetics of this economically important endemic plant.http://dx.doi.org/10.1080/23802359.2019.1671251handeliodendron bodinierichloroplast genomeconservation |
| spellingShingle | Xinmin Tian Xueli Li Haoyu Miao Chunlin Xue Bolun Wang Yu Guo Gucheng Zhang Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China Mitochondrial DNA. Part B. Resources handeliodendron bodinieri chloroplast genome conservation |
| title | Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China |
| title_full | Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China |
| title_fullStr | Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China |
| title_full_unstemmed | Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China |
| title_short | Complete chloroplast genome of an endangered endemic tree, handeliodendron bodinieri (levl.) rehder (sapindaceae) from karst forests of southwest China |
| title_sort | complete chloroplast genome of an endangered endemic tree handeliodendron bodinieri levl rehder sapindaceae from karst forests of southwest china |
| topic | handeliodendron bodinieri chloroplast genome conservation |
| url | http://dx.doi.org/10.1080/23802359.2019.1671251 |
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