The complete chloroplast genome of Stephania tetrandra (Menispermaceae)
The complete chloroplast genome of Stephania tetrandra was sequenced and assembled for the first time. The chloroplast genome is 159,974 bp in length, containing a large single-copy (LSC) region of 90,539 bp and a small single-copy region (SSC) of 20,735 bp, separated by a pair of inverted repeats (...
| Main Authors: | , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-10-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1840935 |
| _version_ | 1797639038443716608 |
|---|---|
| author | Lan Cao Zejing Mu Shasha Sheng Yuanyuan Chen Guoyue Zhong Xiaolang Du |
| author_facet | Lan Cao Zejing Mu Shasha Sheng Yuanyuan Chen Guoyue Zhong Xiaolang Du |
| author_sort | Lan Cao |
| collection | DOAJ |
| description | The complete chloroplast genome of Stephania tetrandra was sequenced and assembled for the first time. The chloroplast genome is 159,974 bp in length, containing a large single-copy (LSC) region of 90,539 bp and a small single-copy region (SSC) of 20,735 bp, separated by a pair of inverted repeats (IRs) of 24,350 bp. The genome contains 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNA genes, and four rRNA genes. Among them, 15 genes have one intron each and three genes contain two introns. The overall GC content is 37.8%, while the corresponding values of LSC, SSC, and IR regions are 35.8, 32.4, and 43.7%, respectively. Phylogenetic analysis showed that S. tetrandra is more closely related to the clade of two species within Stephania, providing new insight into the evolution of Menispermaceae. |
| first_indexed | 2024-03-11T13:12:06Z |
| format | Article |
| id | doaj.art-e6dfd16de6fb420da2ed00b0eccbcc8e |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:12:06Z |
| publishDate | 2020-10-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e6dfd16de6fb420da2ed00b0eccbcc8e2023-11-03T14:08:16ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-10-01543819382010.1080/23802359.2020.18409351840935The complete chloroplast genome of Stephania tetrandra (Menispermaceae)Lan Cao0Zejing Mu1Shasha Sheng2Yuanyuan Chen3Guoyue Zhong4Xiaolang Du5Jiangxi University of Traditional Chinese MedicineJiangxi University of Traditional Chinese MedicineJiangxi University of Traditional Chinese MedicineJiangxi University of Traditional Chinese MedicineJiangxi University of Traditional Chinese MedicineJiangxi University of Traditional Chinese MedicineThe complete chloroplast genome of Stephania tetrandra was sequenced and assembled for the first time. The chloroplast genome is 159,974 bp in length, containing a large single-copy (LSC) region of 90,539 bp and a small single-copy region (SSC) of 20,735 bp, separated by a pair of inverted repeats (IRs) of 24,350 bp. The genome contains 113 unique genes, including 79 protein-coding genes (PCGs), 30 tRNA genes, and four rRNA genes. Among them, 15 genes have one intron each and three genes contain two introns. The overall GC content is 37.8%, while the corresponding values of LSC, SSC, and IR regions are 35.8, 32.4, and 43.7%, respectively. Phylogenetic analysis showed that S. tetrandra is more closely related to the clade of two species within Stephania, providing new insight into the evolution of Menispermaceae.http://dx.doi.org/10.1080/23802359.2020.1840935complete chloroplast genomestephania tetrandramenispermaceae |
| spellingShingle | Lan Cao Zejing Mu Shasha Sheng Yuanyuan Chen Guoyue Zhong Xiaolang Du The complete chloroplast genome of Stephania tetrandra (Menispermaceae) Mitochondrial DNA. Part B. Resources complete chloroplast genome stephania tetrandra menispermaceae |
| title | The complete chloroplast genome of Stephania tetrandra (Menispermaceae) |
| title_full | The complete chloroplast genome of Stephania tetrandra (Menispermaceae) |
| title_fullStr | The complete chloroplast genome of Stephania tetrandra (Menispermaceae) |
| title_full_unstemmed | The complete chloroplast genome of Stephania tetrandra (Menispermaceae) |
| title_short | The complete chloroplast genome of Stephania tetrandra (Menispermaceae) |
| title_sort | complete chloroplast genome of stephania tetrandra menispermaceae |
| topic | complete chloroplast genome stephania tetrandra menispermaceae |
| url | http://dx.doi.org/10.1080/23802359.2020.1840935 |
| work_keys_str_mv | AT lancao thecompletechloroplastgenomeofstephaniatetrandramenispermaceae AT zejingmu thecompletechloroplastgenomeofstephaniatetrandramenispermaceae AT shashasheng thecompletechloroplastgenomeofstephaniatetrandramenispermaceae AT yuanyuanchen thecompletechloroplastgenomeofstephaniatetrandramenispermaceae AT guoyuezhong thecompletechloroplastgenomeofstephaniatetrandramenispermaceae AT xiaolangdu thecompletechloroplastgenomeofstephaniatetrandramenispermaceae AT lancao completechloroplastgenomeofstephaniatetrandramenispermaceae AT zejingmu completechloroplastgenomeofstephaniatetrandramenispermaceae AT shashasheng completechloroplastgenomeofstephaniatetrandramenispermaceae AT yuanyuanchen completechloroplastgenomeofstephaniatetrandramenispermaceae AT guoyuezhong completechloroplastgenomeofstephaniatetrandramenispermaceae AT xiaolangdu completechloroplastgenomeofstephaniatetrandramenispermaceae |