The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae)
We sequenced the complete mitochondrial genomes of Togoperla limbata which is the unique species distributed in Japan to provide supplementary data for future study in phylogenetic studies of Perlidae. This complete mitogenome of T. limbata is 15,915 bp long, including 37 typical genes and a control...
| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2020-07-01
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| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1788465 |
| _version_ | 1797639179685855232 |
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| author | Ying Wang Jinjun Cao Jiajia Chen Weihai Li |
| author_facet | Ying Wang Jinjun Cao Jiajia Chen Weihai Li |
| author_sort | Ying Wang |
| collection | DOAJ |
| description | We sequenced the complete mitochondrial genomes of Togoperla limbata which is the unique species distributed in Japan to provide supplementary data for future study in phylogenetic studies of Perlidae. This complete mitogenome of T. limbata is 15,915 bp long, including 37 typical genes and a control region as other stoneflies. Through the data analysis, the A + T content of the whole mitogenome, PCGs, tRNAs, rRNAs, and control region was 63.7%, 61.3%, 68.7%, 66.8%, and 74.8%. Most PCGs used typical start or stop codon except COI, ND5, and ND1 used the exceptional start codon and the COII and ND5 used the single T as the stop codon. Phylogenetic tree was constructed by using Bayesian inference (BI) and maximum-likelihood (ML) analysis based on the sequences of the 13 PCGs and two rRNAs and the result showed that subfamily Perlinae was a monophyletic group and the clade Togoperla and Paragnetina had a closer relationship. |
| first_indexed | 2024-03-11T13:13:09Z |
| format | Article |
| id | doaj.art-e838d482d91e48eb899e40c9ed163b8c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:09Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-e838d482d91e48eb899e40c9ed163b8c2023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532809281010.1080/23802359.2020.17884651788465The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae)Ying Wang0Jinjun Cao1Jiajia Chen2Weihai Li3Department of Plant Protection, Henan Institute of Science and TechnologyDepartment of Plant Protection, Henan Institute of Science and TechnologyDepartment of Plant Protection, Henan Institute of Science and TechnologyDepartment of Plant Protection, Henan Institute of Science and TechnologyWe sequenced the complete mitochondrial genomes of Togoperla limbata which is the unique species distributed in Japan to provide supplementary data for future study in phylogenetic studies of Perlidae. This complete mitogenome of T. limbata is 15,915 bp long, including 37 typical genes and a control region as other stoneflies. Through the data analysis, the A + T content of the whole mitogenome, PCGs, tRNAs, rRNAs, and control region was 63.7%, 61.3%, 68.7%, 66.8%, and 74.8%. Most PCGs used typical start or stop codon except COI, ND5, and ND1 used the exceptional start codon and the COII and ND5 used the single T as the stop codon. Phylogenetic tree was constructed by using Bayesian inference (BI) and maximum-likelihood (ML) analysis based on the sequences of the 13 PCGs and two rRNAs and the result showed that subfamily Perlinae was a monophyletic group and the clade Togoperla and Paragnetina had a closer relationship.http://dx.doi.org/10.1080/23802359.2020.1788465mitogenomephylogenetictogoperla limbata |
| spellingShingle | Ying Wang Jinjun Cao Jiajia Chen Weihai Li The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae) Mitochondrial DNA. Part B. Resources mitogenome phylogenetic togoperla limbata |
| title | The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae) |
| title_full | The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae) |
| title_fullStr | The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae) |
| title_full_unstemmed | The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae) |
| title_short | The mitochondrial genome of the stonefly Togoperla limbata Pictet (Plecoptera: Perlidae) |
| title_sort | mitochondrial genome of the stonefly togoperla limbata pictet plecoptera perlidae |
| topic | mitogenome phylogenetic togoperla limbata |
| url | http://dx.doi.org/10.1080/23802359.2020.1788465 |
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