STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks
This paper presents the components and integrated outcome of a system that aims to achieve early detection, monitoring and mitigation of pandemic outbreaks. The architecture of the platform aims at providing a number of pandemic-response-related services, on a modular basis, that allows for the easy...
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| Format: | Article |
| Language: | English |
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MDPI AG
2022-05-01
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| Series: | Technologies |
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| Online Access: | https://www.mdpi.com/2227-7080/10/3/63 |
| _version_ | 1797481866899488768 |
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| author | Nikolaos Bakalos Maria Kaselimi Nikolaos Doulamis Anastasios Doulamis Dimitrios Kalogeras Mathaios Bimpas Agapi Davradou Aggeliki Vlachostergiou Anaxagoras Fotopoulos Maria Plakia Alexandros Karalis Sofia Tsekeridou Themistoklis Anagnostopoulos Angela Maria Despotopoulou Ilaria Bonavita Katrina Petersen Leonidas Pelepes Lefteris Voumvourakis Anastasia Anagnostou Derek Groen Kate Mintram Arindam Saha Simon J. E. Taylor Charon van der Ham Patrick Kaleta Dražen Ignjatović Luca Rossi |
| author_facet | Nikolaos Bakalos Maria Kaselimi Nikolaos Doulamis Anastasios Doulamis Dimitrios Kalogeras Mathaios Bimpas Agapi Davradou Aggeliki Vlachostergiou Anaxagoras Fotopoulos Maria Plakia Alexandros Karalis Sofia Tsekeridou Themistoklis Anagnostopoulos Angela Maria Despotopoulou Ilaria Bonavita Katrina Petersen Leonidas Pelepes Lefteris Voumvourakis Anastasia Anagnostou Derek Groen Kate Mintram Arindam Saha Simon J. E. Taylor Charon van der Ham Patrick Kaleta Dražen Ignjatović Luca Rossi |
| author_sort | Nikolaos Bakalos |
| collection | DOAJ |
| description | This paper presents the components and integrated outcome of a system that aims to achieve early detection, monitoring and mitigation of pandemic outbreaks. The architecture of the platform aims at providing a number of pandemic-response-related services, on a modular basis, that allows for the easy customization of the platform to address user’s needs per case. This customization is achieved through its ability to deploy only the necessary, loosely coupled services and tools for each case, and by providing a common authentication, data storage and data exchange infrastructure. This way, the platform can provide the necessary services without the burden of additional services that are not of use in the current deployment (e.g., predictive models for pathogens that are not endemic to the deployment area). All the decisions taken for the communication and integration of the tools that compose the platform adhere to this basic principle. The tools presented here as well as their integration is part of the project STAMINA. |
| first_indexed | 2024-03-09T22:21:39Z |
| format | Article |
| id | doaj.art-e92bf3f47346493bae5c72411a9d7782 |
| institution | Directory Open Access Journal |
| issn | 2227-7080 |
| language | English |
| last_indexed | 2024-03-09T22:21:39Z |
| publishDate | 2022-05-01 |
| publisher | MDPI AG |
| record_format | Article |
| series | Technologies |
| spelling | doaj.art-e92bf3f47346493bae5c72411a9d77822023-11-23T19:14:43ZengMDPI AGTechnologies2227-70802022-05-011036310.3390/technologies10030063STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic OutbreaksNikolaos Bakalos0Maria Kaselimi1Nikolaos Doulamis2Anastasios Doulamis3Dimitrios Kalogeras4Mathaios Bimpas5Agapi Davradou6Aggeliki Vlachostergiou7Anaxagoras Fotopoulos8Maria Plakia9Alexandros Karalis10Sofia Tsekeridou11Themistoklis Anagnostopoulos12Angela Maria Despotopoulou13Ilaria Bonavita14Katrina Petersen15Leonidas Pelepes16Lefteris Voumvourakis17Anastasia Anagnostou18Derek Groen19Kate Mintram20Arindam Saha21Simon J. E. Taylor22Charon van der Ham23Patrick Kaleta24Dražen Ignjatović25Luca Rossi26Institute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceInstitute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceInstitute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceInstitute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceInstitute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceInstitute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceInstitute of Communication and Computer Systems (ICCS), Patission Str. 42, 10682 Athens, GreeceIntrasoft International SA (INTRA), Rue Nicolas Bove 2B, 1253 Luxembourg, LuxembourgIntrasoft International SA (INTRA), Rue Nicolas Bove 2B, 1253 Luxembourg, LuxembourgIntrasoft International SA (INTRA), Rue Nicolas Bove 2B, 1253 Luxembourg, LuxembourgIntrasoft International SA (INTRA), Rue Nicolas Bove 2B, 1253 Luxembourg, LuxembourgTrilateral Research Ltd. (TRI), One Knightsbridge Green Office 5.12, 5th Floor, London SW1X 7QA, UKTrilateral Research Ltd. (TRI), One Knightsbridge Green Office 5.12, 5th Floor, London SW1X 7QA, UKTrilateral Research Ltd. (TRI), One Knightsbridge Green Office 5.12, 5th Floor, London SW1X 7QA, UKSatways-Proionta Kai Ypiresies Tilematikis Diktyakon Kai Tilepikinoniakon Efarmogon Etairia Periorismenis Efthinis Epe (Satways), 15 Megalou Konstantinou, Attica, 14122 Irakleio, GreeceSatways-Proionta Kai Ypiresies Tilematikis Diktyakon Kai Tilepikinoniakon Efarmogon Etairia Periorismenis Efthinis Epe (Satways), 15 Megalou Konstantinou, Attica, 14122 Irakleio, GreeceComputer Science Department, College of Engineering, Design & Physical Sciences, Brunel University London (BUL), Kingston Lane, London Borough of Hillingdon UB8 3PH, UKComputer Science Department, College of Engineering, Design & Physical Sciences, Brunel University London (BUL), Kingston Lane, London Borough of Hillingdon UB8 3PH, UKCrisisplan BV (CPLAN), Frambozenweg 123, 2321 KA Leiden, The NetherlandsCrisisplan BV (CPLAN), Frambozenweg 123, 2321 KA Leiden, The NetherlandsCrisisplan BV (CPLAN), Frambozenweg 123, 2321 KA Leiden, The NetherlandsCrisisplan BV (CPLAN), Frambozenweg 123, 2321 KA Leiden, The NetherlandsCrisisplan BV (CPLAN), Frambozenweg 123, 2321 KA Leiden, The NetherlandsAIT Austrian Institute of Technology GmbH (AIT), Giefinggasse 4, 1210 Wien, AustriaIstituto Per L’interscambio Scientifico (I.S.I), Via Chisola 5, 10126 Torino, ItalyIstituto Per L’interscambio Scientifico (I.S.I), Via Chisola 5, 10126 Torino, ItalyIstituto Per L’interscambio Scientifico (I.S.I), Via Chisola 5, 10126 Torino, ItalyThis paper presents the components and integrated outcome of a system that aims to achieve early detection, monitoring and mitigation of pandemic outbreaks. The architecture of the platform aims at providing a number of pandemic-response-related services, on a modular basis, that allows for the easy customization of the platform to address user’s needs per case. This customization is achieved through its ability to deploy only the necessary, loosely coupled services and tools for each case, and by providing a common authentication, data storage and data exchange infrastructure. This way, the platform can provide the necessary services without the burden of additional services that are not of use in the current deployment (e.g., predictive models for pathogens that are not endemic to the deployment area). All the decisions taken for the communication and integration of the tools that compose the platform adhere to this basic principle. The tools presented here as well as their integration is part of the project STAMINA.https://www.mdpi.com/2227-7080/10/3/63healthcare informaticspandemic outbreak mitigationinformatics platform |
| spellingShingle | Nikolaos Bakalos Maria Kaselimi Nikolaos Doulamis Anastasios Doulamis Dimitrios Kalogeras Mathaios Bimpas Agapi Davradou Aggeliki Vlachostergiou Anaxagoras Fotopoulos Maria Plakia Alexandros Karalis Sofia Tsekeridou Themistoklis Anagnostopoulos Angela Maria Despotopoulou Ilaria Bonavita Katrina Petersen Leonidas Pelepes Lefteris Voumvourakis Anastasia Anagnostou Derek Groen Kate Mintram Arindam Saha Simon J. E. Taylor Charon van der Ham Patrick Kaleta Dražen Ignjatović Luca Rossi STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks Technologies healthcare informatics pandemic outbreak mitigation informatics platform |
| title | STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks |
| title_full | STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks |
| title_fullStr | STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks |
| title_full_unstemmed | STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks |
| title_short | STAMINA: Bioinformatics Platform for Monitoring and Mitigating Pandemic Outbreaks |
| title_sort | stamina bioinformatics platform for monitoring and mitigating pandemic outbreaks |
| topic | healthcare informatics pandemic outbreak mitigation informatics platform |
| url | https://www.mdpi.com/2227-7080/10/3/63 |
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