Classifying the Unclassified: A Phage Classification Method

Classifying the Unclassified: A Phage Classification Method

This work reports the method ClassiPhage to classify phage genomes using sequence derived taxonomic features. ClassiPhage uses a set of phage specific Hidden Markov Models (HMMs) generated from clusters of related proteins. The method was validated on all publicly available genomes of phages that ar...

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Bibliographic Details
Main Authors: Cynthia Maria Chibani, Anton Farr, Sandra Klama, Sascha Dietrich, Heiko Liesegang
Format: Article
Language:English
Published: MDPI AG 2019-02-01
Series:Viruses
Subjects:
Hidden Markov Models
<i>Vibrionaceae</i>
vibriophages
<i>Inoviridae</i>
<i>Myoviridae</i>
<i>Podoviridae</i>
<i>Siphoviridae</i>
phages
classification
protein coding sequences
Online Access:https://www.mdpi.com/1999-4915/11/2/195

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https://www.mdpi.com/1999-4915/11/2/195

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