A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint

Abstract Chromatin replication involves the assembly and activity of the replisome within the nucleosomal landscape. At the core of the replisome is the Mcm2-7 complex (MCM), which is loaded onto DNA after binding to the Origin Recognition Complex (ORC). In yeast, ORC is a dynamic protein that diffu...

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Main Authors: Humberto Sánchez, Zhaowei Liu, Edo van Veen, Theo van Laar, John F. X. Diffley, Nynke H. Dekker
Format: Article
Language:English
Published: Nature Portfolio 2023-10-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-023-42524-8
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author Humberto Sánchez
Zhaowei Liu
Edo van Veen
Theo van Laar
John F. X. Diffley
Nynke H. Dekker
author_facet Humberto Sánchez
Zhaowei Liu
Edo van Veen
Theo van Laar
John F. X. Diffley
Nynke H. Dekker
author_sort Humberto Sánchez
collection DOAJ
description Abstract Chromatin replication involves the assembly and activity of the replisome within the nucleosomal landscape. At the core of the replisome is the Mcm2-7 complex (MCM), which is loaded onto DNA after binding to the Origin Recognition Complex (ORC). In yeast, ORC is a dynamic protein that diffuses rapidly along DNA, unless halted by origin recognition sequences. However, less is known about the dynamics of ORC proteins in the presence of nucleosomes and attendant consequences for MCM loading. To address this, we harnessed an in vitro single-molecule approach to interrogate a chromatinized origin of replication. We find that ORC binds the origin of replication with similar efficiency independently of whether the origin is chromatinized, despite ORC mobility being reduced by the presence of nucleosomes. Recruitment of MCM also proceeds efficiently on a chromatinized origin, but subsequent movement of MCM away from the origin is severely constrained. These findings suggest that chromatinized origins in yeast are essential for the local retention of MCM, which may facilitate subsequent assembly of the replisome.
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spelling doaj.art-e9cfc90ea0f94fb5a860b8c50a7784202023-11-20T09:58:12ZengNature PortfolioNature Communications2041-17232023-10-0114111510.1038/s41467-023-42524-8A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraintHumberto Sánchez0Zhaowei Liu1Edo van Veen2Theo van Laar3John F. X. Diffley4Nynke H. Dekker5Department of Bionanoscience, Kavli Institute of Nanoscience, Delft University of TechnologyDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of TechnologyDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of TechnologyDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of TechnologyChromosome Replication Laboratory, Francis Crick InstituteDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of TechnologyAbstract Chromatin replication involves the assembly and activity of the replisome within the nucleosomal landscape. At the core of the replisome is the Mcm2-7 complex (MCM), which is loaded onto DNA after binding to the Origin Recognition Complex (ORC). In yeast, ORC is a dynamic protein that diffuses rapidly along DNA, unless halted by origin recognition sequences. However, less is known about the dynamics of ORC proteins in the presence of nucleosomes and attendant consequences for MCM loading. To address this, we harnessed an in vitro single-molecule approach to interrogate a chromatinized origin of replication. We find that ORC binds the origin of replication with similar efficiency independently of whether the origin is chromatinized, despite ORC mobility being reduced by the presence of nucleosomes. Recruitment of MCM also proceeds efficiently on a chromatinized origin, but subsequent movement of MCM away from the origin is severely constrained. These findings suggest that chromatinized origins in yeast are essential for the local retention of MCM, which may facilitate subsequent assembly of the replisome.https://doi.org/10.1038/s41467-023-42524-8
spellingShingle Humberto Sánchez
Zhaowei Liu
Edo van Veen
Theo van Laar
John F. X. Diffley
Nynke H. Dekker
A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint
Nature Communications
title A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint
title_full A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint
title_fullStr A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint
title_full_unstemmed A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint
title_short A chromatinized origin reduces the mobility of ORC and MCM through interactions and spatial constraint
title_sort chromatinized origin reduces the mobility of orc and mcm through interactions and spatial constraint
url https://doi.org/10.1038/s41467-023-42524-8
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