A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds
Abstract Common carp (Cyprinus carpio) has an outstanding economic importance in freshwater aquaculture due to its high adaptive capacity to both food and environment. In fact, it is the third most farmed fish species worldwide according to the Food and Agriculture Organization. More than four milli...
| Main Authors: | , , , , , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Wiley
2020-06-01
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| Series: | Ecology and Evolution |
| Subjects: | |
| Online Access: | https://doi.org/10.1002/ece3.6286 |
| _version_ | 1811270711010918400 |
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| author | Artem V. Nedoluzhko Natalia V. Slobodova Fedor Sharko Gulmira M. Shalgimbayeva Svetlana V. Tsygankova Eugenia S. Boulygina Zsigmond Jeney Van Q. Nguyen Thế T. Pham Đức T. Nguyen Alexander A. Volkov Jorge M.O. Fernandes Sergey M. Rastorguev |
| author_facet | Artem V. Nedoluzhko Natalia V. Slobodova Fedor Sharko Gulmira M. Shalgimbayeva Svetlana V. Tsygankova Eugenia S. Boulygina Zsigmond Jeney Van Q. Nguyen Thế T. Pham Đức T. Nguyen Alexander A. Volkov Jorge M.O. Fernandes Sergey M. Rastorguev |
| author_sort | Artem V. Nedoluzhko |
| collection | DOAJ |
| description | Abstract Common carp (Cyprinus carpio) has an outstanding economic importance in freshwater aquaculture due to its high adaptive capacity to both food and environment. In fact, it is the third most farmed fish species worldwide according to the Food and Agriculture Organization. More than four million tons of common carp are produced annually in aquaculture, and more than a hundred thousand tons are caught from the wild. Historically, the common carp was also the first fish species to be domesticated in ancient China, and now, there is a huge variety of domestic carp strains worldwide. In the present study, we used double digestion restriction site‐associated DNA sequencing to genotype several European common carp strains and showed that they are divided into two distinct groups. One of them includes central European common carp strains as well as Ponto–Caspian wild common carp populations, whereas the other group contains several common carp strains that originated in the Soviet Union, mostly as cold‐resistant strains. We believe that breeding with wild Amur carp and subsequent selection of the hybrids for resistance to adverse environmental conditions was the attribute of the second group. We assessed the contribution of wild Amur carp inheritance to the common carp strains and discovered discriminating genes, which differed in allele frequencies between groups. Taken together, our results improve our current understanding of the genetic variability of common carp, namely the structure of natural and artificial carp populations, and the contribution of wild carp traits to domestic strains. |
| first_indexed | 2024-04-12T22:06:59Z |
| format | Article |
| id | doaj.art-e9ddc1c7058f4dbfaabbbba02b5d0c9e |
| institution | Directory Open Access Journal |
| issn | 2045-7758 |
| language | English |
| last_indexed | 2024-04-12T22:06:59Z |
| publishDate | 2020-06-01 |
| publisher | Wiley |
| record_format | Article |
| series | Ecology and Evolution |
| spelling | doaj.art-e9ddc1c7058f4dbfaabbbba02b5d0c9e2022-12-22T03:14:55ZengWileyEcology and Evolution2045-77582020-06-0110125431543910.1002/ece3.6286A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breedsArtem V. Nedoluzhko0Natalia V. Slobodova1Fedor Sharko2Gulmira M. Shalgimbayeva3Svetlana V. Tsygankova4Eugenia S. Boulygina5Zsigmond Jeney6Van Q. Nguyen7Thế T. Pham8Đức T. Nguyen9Alexander A. Volkov10Jorge M.O. Fernandes11Sergey M. Rastorguev12Faculty of Biosciences and Aquaculture Nord University Bodø NorwayNational Research Center “Kurchatov Institute” Moscow RussiaNational Research Center “Kurchatov Institute” Moscow RussiaKazakh Research Institute of Fisheries Almaty Republic of KazakhstanNational Research Center “Kurchatov Institute” Moscow RussiaNational Research Center “Kurchatov Institute” Moscow RussiaNational Agricultural Research and Innovation Center Research Institute for Fisheries and Aquaculture (HAKI) Szarvas HungaryInstitute of Marine Environment and Resources Vietnam Academy of Science and Technology Hanoi VietnamInstitute of Marine Environment and Resources Vietnam Academy of Science and Technology Hanoi VietnamInstitute of Marine Environment and Resources Vietnam Academy of Science and Technology Hanoi VietnamRussian Federal Research Institute of Fisheries and Oceanography Moscow RussiaFaculty of Biosciences and Aquaculture Nord University Bodø NorwayNational Research Center “Kurchatov Institute” Moscow RussiaAbstract Common carp (Cyprinus carpio) has an outstanding economic importance in freshwater aquaculture due to its high adaptive capacity to both food and environment. In fact, it is the third most farmed fish species worldwide according to the Food and Agriculture Organization. More than four million tons of common carp are produced annually in aquaculture, and more than a hundred thousand tons are caught from the wild. Historically, the common carp was also the first fish species to be domesticated in ancient China, and now, there is a huge variety of domestic carp strains worldwide. In the present study, we used double digestion restriction site‐associated DNA sequencing to genotype several European common carp strains and showed that they are divided into two distinct groups. One of them includes central European common carp strains as well as Ponto–Caspian wild common carp populations, whereas the other group contains several common carp strains that originated in the Soviet Union, mostly as cold‐resistant strains. We believe that breeding with wild Amur carp and subsequent selection of the hybrids for resistance to adverse environmental conditions was the attribute of the second group. We assessed the contribution of wild Amur carp inheritance to the common carp strains and discovered discriminating genes, which differed in allele frequencies between groups. Taken together, our results improve our current understanding of the genetic variability of common carp, namely the structure of natural and artificial carp populations, and the contribution of wild carp traits to domestic strains.https://doi.org/10.1002/ece3.6286admixtureamur carp subspeciescarp strain groupsCyprinus carpiodomestic strainsRAD sequencing |
| spellingShingle | Artem V. Nedoluzhko Natalia V. Slobodova Fedor Sharko Gulmira M. Shalgimbayeva Svetlana V. Tsygankova Eugenia S. Boulygina Zsigmond Jeney Van Q. Nguyen Thế T. Pham Đức T. Nguyen Alexander A. Volkov Jorge M.O. Fernandes Sergey M. Rastorguev A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds Ecology and Evolution admixture amur carp subspecies carp strain groups Cyprinus carpio domestic strains RAD sequencing |
| title | A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds |
| title_full | A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds |
| title_fullStr | A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds |
| title_full_unstemmed | A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds |
| title_short | A new strain group of common carp: The genetic differences and admixture events between Cyprinus carpio breeds |
| title_sort | new strain group of common carp the genetic differences and admixture events between cyprinus carpio breeds |
| topic | admixture amur carp subspecies carp strain groups Cyprinus carpio domestic strains RAD sequencing |
| url | https://doi.org/10.1002/ece3.6286 |
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