Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India
We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612....
| Main Authors: | , , , , , |
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| Format: | Article |
| Language: | English |
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Elsevier
2015-03-01
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| Series: | Genomics Data |
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S2213596015000057 |
| _version_ | 1811197642228629504 |
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| author | Rajesh Patel Vishal Mevada Dhaval Prajapati Pravin Dudhagara Prakash Koringa C.G. Joshi |
| author_facet | Rajesh Patel Vishal Mevada Dhaval Prajapati Pravin Dudhagara Prakash Koringa C.G. Joshi |
| author_sort | Rajesh Patel |
| collection | DOAJ |
| description | We report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612. Community metagenomics revealed total 1802 species belonged to 43 different phyla with dominating Marinobacter (48.7%) and Halobacterium (4.6%) genus in bacterial and archaeal domain respectively. Remarkably, 18.2% sequences in a poorly characterized group and 4% gene for various stress responses along with versatile presence of commercial enzyme were evident in a functional metagenome analysis. |
| first_indexed | 2024-04-12T01:18:13Z |
| format | Article |
| id | doaj.art-e9e2083cc11d47b1a73c67ceeedce6c2 |
| institution | Directory Open Access Journal |
| issn | 2213-5960 |
| language | English |
| last_indexed | 2024-04-12T01:18:13Z |
| publishDate | 2015-03-01 |
| publisher | Elsevier |
| record_format | Article |
| series | Genomics Data |
| spelling | doaj.art-e9e2083cc11d47b1a73c67ceeedce6c22022-12-22T03:53:54ZengElsevierGenomics Data2213-59602015-03-013C13713910.1016/j.gdata.2015.01.003Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, IndiaRajesh Patel0Vishal Mevada1Dhaval Prajapati2Pravin Dudhagara3Prakash Koringa4C.G. Joshi5Department of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, IndiaDepartment of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, IndiaDepartment of Life Sciences, Hemchandracharya North Gujarat University, Patan, Gujarat, IndiaDepartment of Biotechnology, Veer Narmad South Gujarat University, Surat, Gujarat, IndiaDepartment of Animal Biotechnology, Anand Agricultural University, Anand, Gujarat, IndiaDepartment of Animal Biotechnology, Anand Agricultural University, Anand, Gujarat, IndiaWe report Metagenome from the saline desert soil sample of Little Rann of Kutch, Gujarat State, India. Metagenome consisted of 633,760 sequences with size 141,307,202 bp and 56% G + C content. Metagenome sequence data are available at EBI under EBI Metagenomics database with accession no. ERP005612. Community metagenomics revealed total 1802 species belonged to 43 different phyla with dominating Marinobacter (48.7%) and Halobacterium (4.6%) genus in bacterial and archaeal domain respectively. Remarkably, 18.2% sequences in a poorly characterized group and 4% gene for various stress responses along with versatile presence of commercial enzyme were evident in a functional metagenome analysis.http://www.sciencedirect.com/science/article/pii/S2213596015000057MicrobiotaMetagenomeLittle Rann of KutchSaline desertCommunity metagenomicsFunctional metagenomics |
| spellingShingle | Rajesh Patel Vishal Mevada Dhaval Prajapati Pravin Dudhagara Prakash Koringa C.G. Joshi Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India Genomics Data Microbiota Metagenome Little Rann of Kutch Saline desert Community metagenomics Functional metagenomics |
| title | Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India |
| title_full | Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India |
| title_fullStr | Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India |
| title_full_unstemmed | Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India |
| title_short | Metagenomic sequence of saline desert microbiota from wild ass sanctuary, Little Rann of Kutch, Gujarat, India |
| title_sort | metagenomic sequence of saline desert microbiota from wild ass sanctuary little rann of kutch gujarat india |
| topic | Microbiota Metagenome Little Rann of Kutch Saline desert Community metagenomics Functional metagenomics |
| url | http://www.sciencedirect.com/science/article/pii/S2213596015000057 |
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