Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis

Like other RNA viruses, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) replicates in host cells, continuously modulating the molecular environment. It encodes 28 multifunctional proteins that induce an imbalance in the metabolic and proteostatic homeostasis in infected cells. Recently,...

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Main Authors: Mercedes Lachén-Montes, Fernando J. Corrales, Joaquín Fernández-Irigoyen, Enrique Santamaría
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-09-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.02101/full
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author Mercedes Lachén-Montes
Mercedes Lachén-Montes
Mercedes Lachén-Montes
Fernando J. Corrales
Fernando J. Corrales
Joaquín Fernández-Irigoyen
Joaquín Fernández-Irigoyen
Joaquín Fernández-Irigoyen
Enrique Santamaría
Enrique Santamaría
Enrique Santamaría
author_facet Mercedes Lachén-Montes
Mercedes Lachén-Montes
Mercedes Lachén-Montes
Fernando J. Corrales
Fernando J. Corrales
Joaquín Fernández-Irigoyen
Joaquín Fernández-Irigoyen
Joaquín Fernández-Irigoyen
Enrique Santamaría
Enrique Santamaría
Enrique Santamaría
author_sort Mercedes Lachén-Montes
collection DOAJ
description Like other RNA viruses, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) replicates in host cells, continuously modulating the molecular environment. It encodes 28 multifunctional proteins that induce an imbalance in the metabolic and proteostatic homeostasis in infected cells. Recently, proteomic approaches have allowed the evaluation of the impact of SARS-CoV-2 infection in human cells. Here, we discuss the current use of proteomics in three major application areas: (i) virus-protein interactomics, (ii) differential proteotyping to map the virus-induced changes in different cell types, and (iii) diagnostic methods for coronavirus infectious disease 2019 (COVID-19). Since the nasal cavity is one of the entry sites for SARS-CoV-2, we will also discuss the potential application of olfactory proteomics to provide novel insights into the olfactory dysfunction triggered by SARS-CoV-2 in patients with COVID-19.
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spelling doaj.art-ea8ed10fc29143169387032e3b23e9bb2022-12-21T18:53:50ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-09-011110.3389/fmicb.2020.02101569052Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory AxisMercedes Lachén-Montes0Mercedes Lachén-Montes1Mercedes Lachén-Montes2Fernando J. Corrales3Fernando J. Corrales4Joaquín Fernández-Irigoyen5Joaquín Fernández-Irigoyen6Joaquín Fernández-Irigoyen7Enrique Santamaría8Enrique Santamaría9Enrique Santamaría10Clinical Neuroproteomics Unit, Proteomics Platform, Navarrabiomed, Complejo Hospitalario de Navarra (CHN), Universidad Pública de Navarra (UPNA), Pamplona, SpainIdiSNA, Navarra Institute for Health Research, Pamplona, SpainProteored-Instituto de Salud Carlos III (ISCIII), Madrid, SpainProteored-Instituto de Salud Carlos III (ISCIII), Madrid, SpainProteomics Unit, National Centre for Biotechnology, Madrid, SpainClinical Neuroproteomics Unit, Proteomics Platform, Navarrabiomed, Complejo Hospitalario de Navarra (CHN), Universidad Pública de Navarra (UPNA), Pamplona, SpainIdiSNA, Navarra Institute for Health Research, Pamplona, SpainProteored-Instituto de Salud Carlos III (ISCIII), Madrid, SpainClinical Neuroproteomics Unit, Proteomics Platform, Navarrabiomed, Complejo Hospitalario de Navarra (CHN), Universidad Pública de Navarra (UPNA), Pamplona, SpainIdiSNA, Navarra Institute for Health Research, Pamplona, SpainProteored-Instituto de Salud Carlos III (ISCIII), Madrid, SpainLike other RNA viruses, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) replicates in host cells, continuously modulating the molecular environment. It encodes 28 multifunctional proteins that induce an imbalance in the metabolic and proteostatic homeostasis in infected cells. Recently, proteomic approaches have allowed the evaluation of the impact of SARS-CoV-2 infection in human cells. Here, we discuss the current use of proteomics in three major application areas: (i) virus-protein interactomics, (ii) differential proteotyping to map the virus-induced changes in different cell types, and (iii) diagnostic methods for coronavirus infectious disease 2019 (COVID-19). Since the nasal cavity is one of the entry sites for SARS-CoV-2, we will also discuss the potential application of olfactory proteomics to provide novel insights into the olfactory dysfunction triggered by SARS-CoV-2 in patients with COVID-19.https://www.frontiersin.org/article/10.3389/fmicb.2020.02101/fullproteomicscoronavirus infectious disease 2019severe acute respiratory syndrome coronavirus-2smellmass-spectrometry
spellingShingle Mercedes Lachén-Montes
Mercedes Lachén-Montes
Mercedes Lachén-Montes
Fernando J. Corrales
Fernando J. Corrales
Joaquín Fernández-Irigoyen
Joaquín Fernández-Irigoyen
Joaquín Fernández-Irigoyen
Enrique Santamaría
Enrique Santamaría
Enrique Santamaría
Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis
Frontiers in Microbiology
proteomics
coronavirus infectious disease 2019
severe acute respiratory syndrome coronavirus-2
smell
mass-spectrometry
title Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis
title_full Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis
title_fullStr Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis
title_full_unstemmed Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis
title_short Proteomics Insights Into the Molecular Basis of SARS-CoV-2 Infection: What We Can Learn From the Human Olfactory Axis
title_sort proteomics insights into the molecular basis of sars cov 2 infection what we can learn from the human olfactory axis
topic proteomics
coronavirus infectious disease 2019
severe acute respiratory syndrome coronavirus-2
smell
mass-spectrometry
url https://www.frontiersin.org/article/10.3389/fmicb.2020.02101/full
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