Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China
Lilium concolor Salisb. is a perennial herb with high ornamental and medicinal value in China. The complete chloroplast genome sequence of L. concolor was assembled using high-throughput sequencing data. The chloroplast genome of L. concolor is 152,625 bp in length and consists of large single-copy...
| Main Authors: | , , , , |
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2022-01-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2021.2006816 |
| _version_ | 1797638673422876672 |
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| author | Fengjie Lei Huanrong Zhang Yiping Long Shengkun Deng Aihua Zhang |
| author_facet | Fengjie Lei Huanrong Zhang Yiping Long Shengkun Deng Aihua Zhang |
| author_sort | Fengjie Lei |
| collection | DOAJ |
| description | Lilium concolor Salisb. is a perennial herb with high ornamental and medicinal value in China. The complete chloroplast genome sequence of L. concolor was assembled using high-throughput sequencing data. The chloroplast genome of L. concolor is 152,625 bp in length and consists of large single-copy (82,056 bp) and small single-copy (17,585 bp) regions, and a pair of inverted repeat (26,492 bp) regions. A total of 131 genes were annotated, these included 85 protein-coding, 38 tRNA, and eight rRNA genes, with an overall GC content of 37.0%. Phylogenetic analysis with 48 chloroplast genomes fully resolved L. concolor in a clade with L. amabile, L. callosum, and L. pumilum. This study further confirmed that chloroplast genomes in the genus Lilium are highly conserved, which supports the conclusions from previous reports. |
| first_indexed | 2024-03-11T13:07:01Z |
| format | Article |
| id | doaj.art-eac0c88f2d0f45ebaa9e1402ee55655c |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:07:01Z |
| publishDate | 2022-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-eac0c88f2d0f45ebaa9e1402ee55655c2023-11-03T14:36:00ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592022-01-0171303110.1080/23802359.2021.20068162006816Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, ChinaFengjie Lei0Huanrong Zhang1Yiping Long2Shengkun Deng3Aihua Zhang4College of Chinese Medicinal Materials, Jilin Agricultural UniversityCollege of Chinese Medicinal Materials, Jilin Agricultural UniversityCollege of Chinese Medicinal Materials, Jilin Agricultural UniversityCollege of Chinese Medicinal Materials, Jilin Agricultural UniversityCollege of Chinese Medicinal Materials, Jilin Agricultural UniversityLilium concolor Salisb. is a perennial herb with high ornamental and medicinal value in China. The complete chloroplast genome sequence of L. concolor was assembled using high-throughput sequencing data. The chloroplast genome of L. concolor is 152,625 bp in length and consists of large single-copy (82,056 bp) and small single-copy (17,585 bp) regions, and a pair of inverted repeat (26,492 bp) regions. A total of 131 genes were annotated, these included 85 protein-coding, 38 tRNA, and eight rRNA genes, with an overall GC content of 37.0%. Phylogenetic analysis with 48 chloroplast genomes fully resolved L. concolor in a clade with L. amabile, L. callosum, and L. pumilum. This study further confirmed that chloroplast genomes in the genus Lilium are highly conserved, which supports the conclusions from previous reports.http://dx.doi.org/10.1080/23802359.2021.2006816complete chloroplast genomelilium concolorphylogenetic analysis |
| spellingShingle | Fengjie Lei Huanrong Zhang Yiping Long Shengkun Deng Aihua Zhang Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China Mitochondrial DNA. Part B. Resources complete chloroplast genome lilium concolor phylogenetic analysis |
| title | Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China |
| title_full | Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China |
| title_fullStr | Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China |
| title_full_unstemmed | Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China |
| title_short | Characteristics and phylogenetic analysis of the complete chloroplast genome of Lilium concolor Salisb. (Liliaceae) from Jilin, China |
| title_sort | characteristics and phylogenetic analysis of the complete chloroplast genome of lilium concolor salisb liliaceae from jilin china |
| topic | complete chloroplast genome lilium concolor phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2021.2006816 |
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