Fitting Markov property to genetic sequences
In this paper DNA sequents are modelled as discrete-state Markov chains. Statistical data is presented in contingency tables form. The generalized logit model is used to test the first-order Markov property for all coding and non-coding subsequences of DNA.
| Main Authors: | , |
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| Format: | Article |
| Language: | English |
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Vilnius University Press
2023-09-01
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| Series: | Lietuvos Matematikos Rinkinys |
| Subjects: | |
| Online Access: | https://www.zurnalai.vu.lt/LMR/article/view/30727 |
| _version_ | 1797198471223050240 |
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| author | Jurgita Židanavičiūtė Tomas Rekašius |
| author_facet | Jurgita Židanavičiūtė Tomas Rekašius |
| author_sort | Jurgita Židanavičiūtė |
| collection | DOAJ |
| description |
In this paper DNA sequents are modelled as discrete-state Markov chains. Statistical data is presented in contingency tables form. The generalized logit model is used to test the first-order Markov property for all coding and non-coding subsequences of DNA.
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| first_indexed | 2024-03-07T14:22:49Z |
| format | Article |
| id | doaj.art-ec0d0092265846f3bece69a129866573 |
| institution | Directory Open Access Journal |
| issn | 0132-2818 2335-898X |
| language | English |
| last_indexed | 2024-04-24T07:00:23Z |
| publishDate | 2023-09-01 |
| publisher | Vilnius University Press |
| record_format | Article |
| series | Lietuvos Matematikos Rinkinys |
| spelling | doaj.art-ec0d0092265846f3bece69a1298665732024-04-22T09:00:48ZengVilnius University PressLietuvos Matematikos Rinkinys0132-28182335-898X2023-09-0146spec.10.15388/LMR.2006.30727Fitting Markov property to genetic sequencesJurgita Židanavičiūtė0Tomas Rekašius1Vilnius Gediminas Technical UniversityVilnius Gediminas Technical University In this paper DNA sequents are modelled as discrete-state Markov chains. Statistical data is presented in contingency tables form. The generalized logit model is used to test the first-order Markov property for all coding and non-coding subsequences of DNA. https://www.zurnalai.vu.lt/LMR/article/view/30727contingency tablesgeneralized logitMarkov chains |
| spellingShingle | Jurgita Židanavičiūtė Tomas Rekašius Fitting Markov property to genetic sequences Lietuvos Matematikos Rinkinys contingency tables generalized logit Markov chains |
| title | Fitting Markov property to genetic sequences |
| title_full | Fitting Markov property to genetic sequences |
| title_fullStr | Fitting Markov property to genetic sequences |
| title_full_unstemmed | Fitting Markov property to genetic sequences |
| title_short | Fitting Markov property to genetic sequences |
| title_sort | fitting markov property to genetic sequences |
| topic | contingency tables generalized logit Markov chains |
| url | https://www.zurnalai.vu.lt/LMR/article/view/30727 |
| work_keys_str_mv | AT jurgitazidanaviciute fittingmarkovpropertytogeneticsequences AT tomasrekasius fittingmarkovpropertytogeneticsequences |