The carbon assimilation network in Escherichia coli is densely connected and largely sign-determined by directions of metabolic fluxes.
Gene regulatory networks consist of direct interactions but also include indirect interactions mediated by metabolites and signaling molecules. We describe how these indirect interactions can be derived from a model of the underlying biochemical reaction network, using weak time-scale assumptions in...
Main Authors: | Valentina Baldazzi, Delphine Ropers, Yves Markowicz, Daniel Kahn, Johannes Geiselmann, Hidde de Jong |
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Format: | Article |
Language: | English |
Published: |
Public Library of Science (PLoS)
2010-06-01
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Series: | PLoS Computational Biology |
Online Access: | http://europepmc.org/articles/PMC2883603?pdf=render |
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