The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology

Global climate change poses challenges to land use worldwide, and we need to reconsider agricultural practices. While it is generally accepted that biodiversity can be used as a biomarker for healthy agroecosystems, we must specify what specifically composes a healthy microbiome. Therefore, understa...

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Main Authors: Salme Timmusk, Taavi Pall, Shmuel Raz, Anastasiia Fetsiukh, Eviatar Nevo
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-05-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2023.1141862/full
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author Salme Timmusk
Taavi Pall
Shmuel Raz
Anastasiia Fetsiukh
Eviatar Nevo
author_facet Salme Timmusk
Taavi Pall
Shmuel Raz
Anastasiia Fetsiukh
Eviatar Nevo
author_sort Salme Timmusk
collection DOAJ
description Global climate change poses challenges to land use worldwide, and we need to reconsider agricultural practices. While it is generally accepted that biodiversity can be used as a biomarker for healthy agroecosystems, we must specify what specifically composes a healthy microbiome. Therefore, understanding how holobionts function in native, harsh, and wild habitats and how rhizobacteria mediate plant and ecosystem biodiversity in the systems enables us to identify key factors for plant fitness. A systems approach to engineering microbial communities by connecting host phenotype adaptive traits would help us understand the increased fitness of holobionts supported by genetic diversity. Identification of genetic loci controlling the interaction of beneficial microbiomes will allow the integration of genomic design into crop breeding programs. Bacteria beneficial to plants have traditionally been conceived as “promoting and regulating plant growth”. The future perspective for agroecosystems should be that microbiomes, via multiple cascades, define plant phenotypes and provide genetic variability for agroecosystems.
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spelling doaj.art-ecbb5207229e42ecb2f807ab75816e8d2023-05-19T05:26:14ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2023-05-011410.3389/fmicb.2023.11418621141862The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecologySalme Timmusk0Taavi Pall1Shmuel Raz2Anastasiia Fetsiukh3Eviatar Nevo4Department of Forest Mycology and Pathology, Uppsala BioCenter, Swedish University of Agricultural Sciences (SLU), Uppsala, SwedenEstonian Health Care Board Department of Gene Technology, Tallinn, EstoniaDepartment of Information Systems, University of Haifa, Haifa, IsraelDepartment of Forest Mycology and Pathology, Uppsala BioCenter, Swedish University of Agricultural Sciences (SLU), Uppsala, SwedenInstitute of Evolution, University of Haifa, Haifa, IsraelGlobal climate change poses challenges to land use worldwide, and we need to reconsider agricultural practices. While it is generally accepted that biodiversity can be used as a biomarker for healthy agroecosystems, we must specify what specifically composes a healthy microbiome. Therefore, understanding how holobionts function in native, harsh, and wild habitats and how rhizobacteria mediate plant and ecosystem biodiversity in the systems enables us to identify key factors for plant fitness. A systems approach to engineering microbial communities by connecting host phenotype adaptive traits would help us understand the increased fitness of holobionts supported by genetic diversity. Identification of genetic loci controlling the interaction of beneficial microbiomes will allow the integration of genomic design into crop breeding programs. Bacteria beneficial to plants have traditionally been conceived as “promoting and regulating plant growth”. The future perspective for agroecosystems should be that microbiomes, via multiple cascades, define plant phenotypes and provide genetic variability for agroecosystems.https://www.frontiersin.org/articles/10.3389/fmicb.2023.1141862/fullsymbiotic extended phenotypesnativeharshand wild agricultural systemshologenomehorizontal DNA transfer
spellingShingle Salme Timmusk
Taavi Pall
Shmuel Raz
Anastasiia Fetsiukh
Eviatar Nevo
The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
Frontiers in Microbiology
symbiotic extended phenotypes
native
harsh
and wild agricultural systems
hologenome
horizontal DNA transfer
title The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
title_full The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
title_fullStr The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
title_full_unstemmed The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
title_short The potential for plant growth-promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
title_sort potential for plant growth promoting bacteria to impact crop productivity in future agricultural systems is linked to understanding the principles of microbial ecology
topic symbiotic extended phenotypes
native
harsh
and wild agricultural systems
hologenome
horizontal DNA transfer
url https://www.frontiersin.org/articles/10.3389/fmicb.2023.1141862/full
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