Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly

Nucleoporin (NUP) 85 is a member of the Y-complex of nuclear pore complex (NPC) that is key for nucleocytoplasmic transport function, regulation of mitosis, transcription, and chromatin organization. Mutations in various nucleoporin genes have been linked to several human diseases. Among them, NUP85...

Full description

Bibliographic Details
Main Authors: Ethiraj Ravindran, Gaetan Lesca, Louis Januel, Linus Goldgruber, Achim Dickmanns, Henri Margot, Angela M. Kaindl
Format: Article
Language:English
Published: Frontiers Media S.A. 2023-02-01
Series:Frontiers in Neurology
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fneur.2023.1124886/full
_version_ 1811168375100932096
author Ethiraj Ravindran
Ethiraj Ravindran
Ethiraj Ravindran
Gaetan Lesca
Gaetan Lesca
Louis Januel
Linus Goldgruber
Achim Dickmanns
Henri Margot
Angela M. Kaindl
Angela M. Kaindl
Angela M. Kaindl
author_facet Ethiraj Ravindran
Ethiraj Ravindran
Ethiraj Ravindran
Gaetan Lesca
Gaetan Lesca
Louis Januel
Linus Goldgruber
Achim Dickmanns
Henri Margot
Angela M. Kaindl
Angela M. Kaindl
Angela M. Kaindl
author_sort Ethiraj Ravindran
collection DOAJ
description Nucleoporin (NUP) 85 is a member of the Y-complex of nuclear pore complex (NPC) that is key for nucleocytoplasmic transport function, regulation of mitosis, transcription, and chromatin organization. Mutations in various nucleoporin genes have been linked to several human diseases. Among them, NUP85 was linked to childhood-onset steroid-resistant nephrotic syndrome (SRNS) in four affected individuals with intellectual disability but no microcephaly. Recently, we broaden the phenotype spectrum of NUP85-associated disease by reporting NUP85 variants in two unrelated individuals with primary autosomal recessive microcephaly (MCPH) and Seckel syndrome (SCKS) spectrum disorders (MCPH-SCKS) without SRNS. In this study, we report compound heterozygous NUP85 variants in an index patient with only MCPH phenotype, but neither Seckel syndrome nor SRNS was reported. We showed that the identified missense variants cause reduced cell viability of patient-derived fibroblasts. Structural simulation analysis of double variants is predicted to alter the structure of NUP85 and its interactions with neighboring NUPs. Our study thereby further expands the phenotypic spectrum of NUP85-associated human disorder and emphasizes the crucial role of NUP85 in the brain development and function.
first_indexed 2024-04-10T16:25:15Z
format Article
id doaj.art-ed1e140840424257b23b4291c8670577
institution Directory Open Access Journal
issn 1664-2295
language English
last_indexed 2024-04-10T16:25:15Z
publishDate 2023-02-01
publisher Frontiers Media S.A.
record_format Article
series Frontiers in Neurology
spelling doaj.art-ed1e140840424257b23b4291c86705772023-02-09T07:20:56ZengFrontiers Media S.A.Frontiers in Neurology1664-22952023-02-011410.3389/fneur.2023.11248861124886Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephalyEthiraj Ravindran0Ethiraj Ravindran1Ethiraj Ravindran2Gaetan Lesca3Gaetan Lesca4Louis Januel5Linus Goldgruber6Achim Dickmanns7Henri Margot8Angela M. Kaindl9Angela M. Kaindl10Angela M. Kaindl11Institute of Cell Biology and Neurobiology, Charité – Universitätsmedizin Berlin, Berlin, GermanyDepartment of Pediatric Neurology, Charité – Universitätsmedizin Berlin, Berlin, GermanyCenter for Chronically Sick Children (Sozialpädiatrisches Zentrum, SPZ), Charité – Universitätsmedizin Berlin, Berlin, GermanyDepartment of Genetics, Hospices Civils de Lyon, Groupe Hospitalier Est, Bron, FranceInstitut NeuroMyoGene PNMG, CNRS UMR5310, INSERM U1217, Université Claude Bernard Lyon 1, Lyon, FranceDepartment of Genetics, Hospices Civils de Lyon, Groupe Hospitalier Est, Bron, FranceDepartment of Biomedical Engineering, Veterinärmedizinische Universität (Vetmeduni), Vienna, AustriaDepartment of Molecular Structural Biology, Institute for Microbiology and Genetics (GZMB), Georg-August-University Göttingen, Göttingen, GermanyDepartment of Medical Genetics, University of Bordeaux, MRGM INSERM U1211, CHU de Bordeaux, Bordeaux, FranceInstitute of Cell Biology and Neurobiology, Charité – Universitätsmedizin Berlin, Berlin, GermanyDepartment of Pediatric Neurology, Charité – Universitätsmedizin Berlin, Berlin, GermanyCenter for Chronically Sick Children (Sozialpädiatrisches Zentrum, SPZ), Charité – Universitätsmedizin Berlin, Berlin, GermanyNucleoporin (NUP) 85 is a member of the Y-complex of nuclear pore complex (NPC) that is key for nucleocytoplasmic transport function, regulation of mitosis, transcription, and chromatin organization. Mutations in various nucleoporin genes have been linked to several human diseases. Among them, NUP85 was linked to childhood-onset steroid-resistant nephrotic syndrome (SRNS) in four affected individuals with intellectual disability but no microcephaly. Recently, we broaden the phenotype spectrum of NUP85-associated disease by reporting NUP85 variants in two unrelated individuals with primary autosomal recessive microcephaly (MCPH) and Seckel syndrome (SCKS) spectrum disorders (MCPH-SCKS) without SRNS. In this study, we report compound heterozygous NUP85 variants in an index patient with only MCPH phenotype, but neither Seckel syndrome nor SRNS was reported. We showed that the identified missense variants cause reduced cell viability of patient-derived fibroblasts. Structural simulation analysis of double variants is predicted to alter the structure of NUP85 and its interactions with neighboring NUPs. Our study thereby further expands the phenotypic spectrum of NUP85-associated human disorder and emphasizes the crucial role of NUP85 in the brain development and function.https://www.frontiersin.org/articles/10.3389/fneur.2023.1124886/fullNUP85microcephalybrain developmentspeech disorderMCPH-SCKS
spellingShingle Ethiraj Ravindran
Ethiraj Ravindran
Ethiraj Ravindran
Gaetan Lesca
Gaetan Lesca
Louis Januel
Linus Goldgruber
Achim Dickmanns
Henri Margot
Angela M. Kaindl
Angela M. Kaindl
Angela M. Kaindl
Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly
Frontiers in Neurology
NUP85
microcephaly
brain development
speech disorder
MCPH-SCKS
title Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly
title_full Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly
title_fullStr Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly
title_full_unstemmed Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly
title_short Case report: Compound heterozygous NUP85 variants cause autosomal recessive primary microcephaly
title_sort case report compound heterozygous nup85 variants cause autosomal recessive primary microcephaly
topic NUP85
microcephaly
brain development
speech disorder
MCPH-SCKS
url https://www.frontiersin.org/articles/10.3389/fneur.2023.1124886/full
work_keys_str_mv AT ethirajravindran casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT ethirajravindran casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT ethirajravindran casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT gaetanlesca casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT gaetanlesca casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT louisjanuel casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT linusgoldgruber casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT achimdickmanns casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT henrimargot casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT angelamkaindl casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT angelamkaindl casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly
AT angelamkaindl casereportcompoundheterozygousnup85variantscauseautosomalrecessiveprimarymicrocephaly