Data workflows and visualization in support of surveillance practice
The Swedish National Veterinary Institute (SVA) is working on implementing reusable and adaptable workflows for epidemiological analysis and dynamic report generation to improve disease surveillance. Important components of this work include: data access, development environment, computational resou...
| Main Authors: | , , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Frontiers Media S.A.
2023-02-01
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| Series: | Frontiers in Veterinary Science |
| Subjects: | |
| Online Access: | https://www.frontiersin.org/articles/10.3389/fvets.2023.1129863/full |
| _version_ | 1811168314139869184 |
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| author | Wiktor Gustafsson Fernanda C. Dórea Stefan Widgren Jenny Frössling Gema Vidal Hyeyoung Kim Wonhee Cha Arianna Comin Ivana Rodriguez Ewerlöf Thomas Rosendal |
| author_facet | Wiktor Gustafsson Fernanda C. Dórea Stefan Widgren Jenny Frössling Gema Vidal Hyeyoung Kim Wonhee Cha Arianna Comin Ivana Rodriguez Ewerlöf Thomas Rosendal |
| author_sort | Wiktor Gustafsson |
| collection | DOAJ |
| description | The Swedish National Veterinary Institute (SVA) is working on implementing reusable and adaptable workflows for epidemiological analysis and dynamic report generation to improve disease surveillance. Important components of this work include: data access, development environment, computational resources and cloud-based management. The development environment relies on Git for code collaboration and version control and the R language for statistical computing and data visualization. The computational resources include both local and cloud-based systems, with automatic workflows managed in the cloud. The workflows are designed to be flexible and adaptable to changing data sources and stakeholder demands, with the ultimate goal to create a robust infrastructure for the delivery of actionable epidemiological information. |
| first_indexed | 2024-04-10T16:24:04Z |
| format | Article |
| id | doaj.art-ee436864c3304c7b88b6831494de3e39 |
| institution | Directory Open Access Journal |
| issn | 2297-1769 |
| language | English |
| last_indexed | 2024-04-10T16:24:04Z |
| publishDate | 2023-02-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| series | Frontiers in Veterinary Science |
| spelling | doaj.art-ee436864c3304c7b88b6831494de3e392023-02-09T08:55:25ZengFrontiers Media S.A.Frontiers in Veterinary Science2297-17692023-02-011010.3389/fvets.2023.11298631129863Data workflows and visualization in support of surveillance practiceWiktor GustafssonFernanda C. DóreaStefan WidgrenJenny FrösslingGema VidalHyeyoung KimWonhee ChaArianna CominIvana Rodriguez EwerlöfThomas RosendalThe Swedish National Veterinary Institute (SVA) is working on implementing reusable and adaptable workflows for epidemiological analysis and dynamic report generation to improve disease surveillance. Important components of this work include: data access, development environment, computational resources and cloud-based management. The development environment relies on Git for code collaboration and version control and the R language for statistical computing and data visualization. The computational resources include both local and cloud-based systems, with automatic workflows managed in the cloud. The workflows are designed to be flexible and adaptable to changing data sources and stakeholder demands, with the ultimate goal to create a robust infrastructure for the delivery of actionable epidemiological information.https://www.frontiersin.org/articles/10.3389/fvets.2023.1129863/fullanimal healthepidemiologydata-drivendashboardsdigitalizationautomation |
| spellingShingle | Wiktor Gustafsson Fernanda C. Dórea Stefan Widgren Jenny Frössling Gema Vidal Hyeyoung Kim Wonhee Cha Arianna Comin Ivana Rodriguez Ewerlöf Thomas Rosendal Data workflows and visualization in support of surveillance practice Frontiers in Veterinary Science animal health epidemiology data-driven dashboards digitalization automation |
| title | Data workflows and visualization in support of surveillance practice |
| title_full | Data workflows and visualization in support of surveillance practice |
| title_fullStr | Data workflows and visualization in support of surveillance practice |
| title_full_unstemmed | Data workflows and visualization in support of surveillance practice |
| title_short | Data workflows and visualization in support of surveillance practice |
| title_sort | data workflows and visualization in support of surveillance practice |
| topic | animal health epidemiology data-driven dashboards digitalization automation |
| url | https://www.frontiersin.org/articles/10.3389/fvets.2023.1129863/full |
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