Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses

The crystal structure of moganite from the Mogán formation on Gran Canaria has been re-investigated using high-resolution synchrotron X-ray diffraction (XRD) and X-ray/neutron pair distribution function (PDF) analyses. Our study for the first time reports the anisotropic atomic displacement paramete...

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Main Authors: Seungyeol Lee, Huifang Xu, Hongwu Xu, Joerg Neuefeind
Format: Article
Language:English
Published: MDPI AG 2021-03-01
Series:Minerals
Subjects:
Online Access:https://www.mdpi.com/2075-163X/11/3/272
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author Seungyeol Lee
Huifang Xu
Hongwu Xu
Joerg Neuefeind
author_facet Seungyeol Lee
Huifang Xu
Hongwu Xu
Joerg Neuefeind
author_sort Seungyeol Lee
collection DOAJ
description The crystal structure of moganite from the Mogán formation on Gran Canaria has been re-investigated using high-resolution synchrotron X-ray diffraction (XRD) and X-ray/neutron pair distribution function (PDF) analyses. Our study for the first time reports the anisotropic atomic displacement parameters (ADPs) of a natural moganite. Rietveld analysis of synchrotron XRD data determined the crystal structure of moganite with the space group <i>I</i>2/<i>a</i>. The refined unit-cell parameters are <i>a</i> = 8.7363(8), <i>b</i> = 4.8688(5), <i>c</i> = 10.7203(9) Å, and β = 90.212(4)°. The ADPs of Si and O in moganite were obtained from X-ray and neutron PDF analyses. The shapes and orientations of the anisotropic ellipsoids determined from X-ray and neutron measurements are similar. The anisotropic ellipsoids for O extend along planes perpendicular to the Si-Si axis of corner-sharing SiO<sub>4</sub> tetrahedra, suggesting precession-like movement. Neutron PDF result confirms the occurrence of OH over some of the tetrahedral sites. We postulate that moganite nanomineral is stable with respect to quartz in hypersaline water. The ADPs of moganite show a similar trend as those of quartz determined by single-crystal XRD. In short, the combined methods can provide high-quality structural parameters of moganite nanomineral, including its ADPs and extra OH position at the surface. This approach can be used as an alternative means for solving the structures of crystals that are not large enough for single-crystal XRD measurements, such as fine-grained and nanocrystalline minerals formed in various geological environments.
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spelling doaj.art-efb907b48e4442abbebbe1b9801f87482023-12-03T12:53:22ZengMDPI AGMinerals2075-163X2021-03-0111327210.3390/min11030272Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function AnalysesSeungyeol Lee0Huifang Xu1Hongwu Xu2Joerg Neuefeind3Department of Geoscience, University of Wisconsin–Madison, Madison, WI 53706, USADepartment of Geoscience, University of Wisconsin–Madison, Madison, WI 53706, USAEarth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM 87545, USANeutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831, USAThe crystal structure of moganite from the Mogán formation on Gran Canaria has been re-investigated using high-resolution synchrotron X-ray diffraction (XRD) and X-ray/neutron pair distribution function (PDF) analyses. Our study for the first time reports the anisotropic atomic displacement parameters (ADPs) of a natural moganite. Rietveld analysis of synchrotron XRD data determined the crystal structure of moganite with the space group <i>I</i>2/<i>a</i>. The refined unit-cell parameters are <i>a</i> = 8.7363(8), <i>b</i> = 4.8688(5), <i>c</i> = 10.7203(9) Å, and β = 90.212(4)°. The ADPs of Si and O in moganite were obtained from X-ray and neutron PDF analyses. The shapes and orientations of the anisotropic ellipsoids determined from X-ray and neutron measurements are similar. The anisotropic ellipsoids for O extend along planes perpendicular to the Si-Si axis of corner-sharing SiO<sub>4</sub> tetrahedra, suggesting precession-like movement. Neutron PDF result confirms the occurrence of OH over some of the tetrahedral sites. We postulate that moganite nanomineral is stable with respect to quartz in hypersaline water. The ADPs of moganite show a similar trend as those of quartz determined by single-crystal XRD. In short, the combined methods can provide high-quality structural parameters of moganite nanomineral, including its ADPs and extra OH position at the surface. This approach can be used as an alternative means for solving the structures of crystals that are not large enough for single-crystal XRD measurements, such as fine-grained and nanocrystalline minerals formed in various geological environments.https://www.mdpi.com/2075-163X/11/3/272moganitequartzanisotropic atomic displacement parametersynchrotron X-ray diffractionneutron scatteringpair distribution function analysis
spellingShingle Seungyeol Lee
Huifang Xu
Hongwu Xu
Joerg Neuefeind
Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses
Minerals
moganite
quartz
anisotropic atomic displacement parameter
synchrotron X-ray diffraction
neutron scattering
pair distribution function analysis
title Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses
title_full Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses
title_fullStr Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses
title_full_unstemmed Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses
title_short Crystal Structure of Moganite and Its Anisotropic Atomic Displacement Parameters Determined by Synchrotron X-ray Diffraction and X-ray/Neutron Pair Distribution Function Analyses
title_sort crystal structure of moganite and its anisotropic atomic displacement parameters determined by synchrotron x ray diffraction and x ray neutron pair distribution function analyses
topic moganite
quartz
anisotropic atomic displacement parameter
synchrotron X-ray diffraction
neutron scattering
pair distribution function analysis
url https://www.mdpi.com/2075-163X/11/3/272
work_keys_str_mv AT seungyeollee crystalstructureofmoganiteanditsanisotropicatomicdisplacementparametersdeterminedbysynchrotronxraydiffractionandxrayneutronpairdistributionfunctionanalyses
AT huifangxu crystalstructureofmoganiteanditsanisotropicatomicdisplacementparametersdeterminedbysynchrotronxraydiffractionandxrayneutronpairdistributionfunctionanalyses
AT hongwuxu crystalstructureofmoganiteanditsanisotropicatomicdisplacementparametersdeterminedbysynchrotronxraydiffractionandxrayneutronpairdistributionfunctionanalyses
AT joergneuefeind crystalstructureofmoganiteanditsanisotropicatomicdisplacementparametersdeterminedbysynchrotronxraydiffractionandxrayneutronpairdistributionfunctionanalyses