Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins

Insulin-degrading enzyme (IDE) is a highly conserved metalloprotease that is mainly localized in the cytosol. Although IDE can degrade insulin and some other low molecular weight substrates efficiently, its ubiquitous expression suggests additional functions supported by experimental findings, such...

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Main Authors: Ayse Yilmaz, Chiara Guerrera, Emmanuelle Waeckel-Énée, Joanna Lipecka, Barbara Bertocci, Peter van Endert
Format: Article
Language:English
Published: MDPI AG 2023-05-01
Series:Biomolecules
Subjects:
Online Access:https://www.mdpi.com/2218-273X/13/6/890
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author Ayse Yilmaz
Chiara Guerrera
Emmanuelle Waeckel-Énée
Joanna Lipecka
Barbara Bertocci
Peter van Endert
author_facet Ayse Yilmaz
Chiara Guerrera
Emmanuelle Waeckel-Énée
Joanna Lipecka
Barbara Bertocci
Peter van Endert
author_sort Ayse Yilmaz
collection DOAJ
description Insulin-degrading enzyme (IDE) is a highly conserved metalloprotease that is mainly localized in the cytosol. Although IDE can degrade insulin and some other low molecular weight substrates efficiently, its ubiquitous expression suggests additional functions supported by experimental findings, such as a role in stress responses and cellular protein homeostasis. The translation of a long full-length IDE transcript has been reported to result in targeting to mitochondria, but the role of IDE in this compartment is unknown. To obtain initial leads on the function of IDE in mitochondria, we used a proximity biotinylation approach to identify proteins interacting with wild-type and protease-dead IDE targeted to the mitochondrial matrix. We find that IDE interacts with multiple mitochondrial ribosomal proteins as well as with proteins involved in the synthesis and assembly of mitochondrial complex I and IV. The mitochondrial interactomes of wild type and mutant IDE are highly similar and do not reveal any likely proteolytic IDE substrates. We speculate that IDE could adopt similar additional non-proteolytic functions in mitochondria as in the cytosol, acting as a chaperone and contributing to protein homeostasis and stress responses.
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spelling doaj.art-efcd5ab347e24b2098cf151936445e132023-11-18T09:30:16ZengMDPI AGBiomolecules2218-273X2023-05-0113689010.3390/biom13060890Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain ProteinsAyse Yilmaz0Chiara Guerrera1Emmanuelle Waeckel-Énée2Joanna Lipecka3Barbara Bertocci4Peter van Endert5Institut Necker Enfants Malades, Université Paris Cité, INSERM, CNRS, F-75015 Paris, FranceStructure Fédérative de Recherche Necker, Proteomics Platform, Université Paris Cité, INSERM, CNRS, F-75015 Paris, FranceInstitut Necker Enfants Malades, Université Paris Cité, INSERM, CNRS, F-75015 Paris, FranceStructure Fédérative de Recherche Necker, Proteomics Platform, Université Paris Cité, INSERM, CNRS, F-75015 Paris, FranceInstitut Necker Enfants Malades, Université Paris Cité, INSERM, CNRS, F-75015 Paris, FranceInstitut Necker Enfants Malades, Université Paris Cité, INSERM, CNRS, F-75015 Paris, FranceInsulin-degrading enzyme (IDE) is a highly conserved metalloprotease that is mainly localized in the cytosol. Although IDE can degrade insulin and some other low molecular weight substrates efficiently, its ubiquitous expression suggests additional functions supported by experimental findings, such as a role in stress responses and cellular protein homeostasis. The translation of a long full-length IDE transcript has been reported to result in targeting to mitochondria, but the role of IDE in this compartment is unknown. To obtain initial leads on the function of IDE in mitochondria, we used a proximity biotinylation approach to identify proteins interacting with wild-type and protease-dead IDE targeted to the mitochondrial matrix. We find that IDE interacts with multiple mitochondrial ribosomal proteins as well as with proteins involved in the synthesis and assembly of mitochondrial complex I and IV. The mitochondrial interactomes of wild type and mutant IDE are highly similar and do not reveal any likely proteolytic IDE substrates. We speculate that IDE could adopt similar additional non-proteolytic functions in mitochondria as in the cytosol, acting as a chaperone and contributing to protein homeostasis and stress responses.https://www.mdpi.com/2218-273X/13/6/890mitochondrionrespiratory chainmitochondrial translationchaperone
spellingShingle Ayse Yilmaz
Chiara Guerrera
Emmanuelle Waeckel-Énée
Joanna Lipecka
Barbara Bertocci
Peter van Endert
Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins
Biomolecules
mitochondrion
respiratory chain
mitochondrial translation
chaperone
title Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins
title_full Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins
title_fullStr Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins
title_full_unstemmed Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins
title_short Insulin-Degrading Enzyme Interacts with Mitochondrial Ribosomes and Respiratory Chain Proteins
title_sort insulin degrading enzyme interacts with mitochondrial ribosomes and respiratory chain proteins
topic mitochondrion
respiratory chain
mitochondrial translation
chaperone
url https://www.mdpi.com/2218-273X/13/6/890
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AT chiaraguerrera insulindegradingenzymeinteractswithmitochondrialribosomesandrespiratorychainproteins
AT emmanuellewaeckelenee insulindegradingenzymeinteractswithmitochondrialribosomesandrespiratorychainproteins
AT joannalipecka insulindegradingenzymeinteractswithmitochondrialribosomesandrespiratorychainproteins
AT barbarabertocci insulindegradingenzymeinteractswithmitochondrialribosomesandrespiratorychainproteins
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