Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model
pdacR is an open-source R package and web-based platform that enables community exploration of pancreatic ductal adenocarcinoma (PDAC) gene expression datasets. pdacR is used to interrogate the specificities of popular PDAC molecular subtypes.
| Main Authors: | , , , , , , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Nature Portfolio
2023-02-01
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| Series: | Communications Biology |
| Online Access: | https://doi.org/10.1038/s42003-023-04461-6 |
| _version_ | 1811165806582562816 |
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| author | Luke A. Torre-Healy Ryan R. Kawalerski Ki Oh Lucie Chrastecka Xianlu L. Peng Andrew J. Aguirre Naim U. Rashid Jen Jen Yeh Richard A. Moffitt |
| author_facet | Luke A. Torre-Healy Ryan R. Kawalerski Ki Oh Lucie Chrastecka Xianlu L. Peng Andrew J. Aguirre Naim U. Rashid Jen Jen Yeh Richard A. Moffitt |
| author_sort | Luke A. Torre-Healy |
| collection | DOAJ |
| description | pdacR is an open-source R package and web-based platform that enables community exploration of pancreatic ductal adenocarcinoma (PDAC) gene expression datasets. pdacR is used to interrogate the specificities of popular PDAC molecular subtypes. |
| first_indexed | 2024-04-10T15:42:36Z |
| format | Article |
| id | doaj.art-f01dcb81e2df4174b75f2a337239323f |
| institution | Directory Open Access Journal |
| issn | 2399-3642 |
| language | English |
| last_indexed | 2024-04-10T15:42:36Z |
| publishDate | 2023-02-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Communications Biology |
| spelling | doaj.art-f01dcb81e2df4174b75f2a337239323f2023-02-12T12:19:44ZengNature PortfolioCommunications Biology2399-36422023-02-016111010.1038/s42003-023-04461-6Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype modelLuke A. Torre-Healy0Ryan R. Kawalerski1Ki Oh2Lucie Chrastecka3Xianlu L. Peng4Andrew J. Aguirre5Naim U. Rashid6Jen Jen Yeh7Richard A. Moffitt8Department of Biomedical Informatics, Stony Brook MedicineDepartment of Biomedical Informatics, Stony Brook MedicineDepartment of Biomedical Informatics, Stony Brook MedicineDepartment of Pharmacological Sciences, Stony Brook MedicineDepartment of Pharmacology, University of North CarolinaDepartment of Medical Oncology, Dana-Farber Cancer InstituteLineberger Comprehensive Cancer Center, University of North CarolinaDepartment of Pharmacology, University of North CarolinaDepartment of Biomedical Informatics, Stony Brook MedicinepdacR is an open-source R package and web-based platform that enables community exploration of pancreatic ductal adenocarcinoma (PDAC) gene expression datasets. pdacR is used to interrogate the specificities of popular PDAC molecular subtypes.https://doi.org/10.1038/s42003-023-04461-6 |
| spellingShingle | Luke A. Torre-Healy Ryan R. Kawalerski Ki Oh Lucie Chrastecka Xianlu L. Peng Andrew J. Aguirre Naim U. Rashid Jen Jen Yeh Richard A. Moffitt Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model Communications Biology |
| title | Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model |
| title_full | Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model |
| title_fullStr | Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model |
| title_full_unstemmed | Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model |
| title_short | Open-source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform (pdacR) supports a two-subtype model |
| title_sort | open source curation of a pancreatic ductal adenocarcinoma gene expression analysis platform pdacr supports a two subtype model |
| url | https://doi.org/10.1038/s42003-023-04461-6 |
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