The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae
Bryophytes are a highly diverse group containing more than 12,800 species. Haplocladium microphyllum is in a large moss belonging to the family Thuidiaceae. We report the complete chloroplast (124,478 bp) genome sequence of H. microphyllum, it includes a pair of inverted repeat regions (IRs, 9727 bp...
| Glavni autori: | , , , |
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| Format: | Članak |
| Jezik: | English |
| Izdano: |
Taylor & Francis Group
2020-07-01
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| Serija: | Mitochondrial DNA. Part B. Resources |
| Teme: | |
| Online pristup: | http://dx.doi.org/10.1080/23802359.2020.1789006 |
| _version_ | 1827772814233436160 |
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| author | Lihui Mao Huaqiao Ding Qing Dong Danqing Tian |
| author_facet | Lihui Mao Huaqiao Ding Qing Dong Danqing Tian |
| author_sort | Lihui Mao |
| collection | DOAJ |
| description | Bryophytes are a highly diverse group containing more than 12,800 species. Haplocladium microphyllum is in a large moss belonging to the family Thuidiaceae. We report the complete chloroplast (124,478 bp) genome sequence of H. microphyllum, it includes a pair of inverted repeat regions (IRs, 9727 bp), one large single-copy (LSC, 86,528 bp) region, and one small single-copy (SSC, 18,496 bp) region. Besides, the complete chloroplast genome contains 134 genes in total, including 88 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that H. microphyllum has the closest relationship with Sanionia uncinata in Amblystegiaceae. Our study lays a foundation for further research like speciation of this species and the phylogeny of the Thuidiaceae family. |
| first_indexed | 2024-03-11T13:13:11Z |
| format | Article |
| id | doaj.art-f022c43f4d9b40e99246ee0fded1af84 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:13:11Z |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f022c43f4d9b40e99246ee0fded1af842023-11-03T14:00:31ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532813281410.1080/23802359.2020.17890061789006The chloroplast genome of the moss Haplocladium microphyllum, first in family ThuidiaceaeLihui Mao0Huaqiao Ding1Qing Dong2Danqing Tian3Zhejiang Institute of Landscape Plants and FlowersZhejiang Institute of Landscape Plants and FlowersZhejiang Institute of Landscape Plants and FlowersZhejiang Institute of Landscape Plants and FlowersBryophytes are a highly diverse group containing more than 12,800 species. Haplocladium microphyllum is in a large moss belonging to the family Thuidiaceae. We report the complete chloroplast (124,478 bp) genome sequence of H. microphyllum, it includes a pair of inverted repeat regions (IRs, 9727 bp), one large single-copy (LSC, 86,528 bp) region, and one small single-copy (SSC, 18,496 bp) region. Besides, the complete chloroplast genome contains 134 genes in total, including 88 protein-coding genes, 38 tRNA genes, and eight rRNA genes. Phylogenetic analysis showed that H. microphyllum has the closest relationship with Sanionia uncinata in Amblystegiaceae. Our study lays a foundation for further research like speciation of this species and the phylogeny of the Thuidiaceae family.http://dx.doi.org/10.1080/23802359.2020.1789006bryophytesthuidiaceaechloroplastnext-generation sequencing |
| spellingShingle | Lihui Mao Huaqiao Ding Qing Dong Danqing Tian The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae Mitochondrial DNA. Part B. Resources bryophytes thuidiaceae chloroplast next-generation sequencing |
| title | The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae |
| title_full | The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae |
| title_fullStr | The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae |
| title_full_unstemmed | The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae |
| title_short | The chloroplast genome of the moss Haplocladium microphyllum, first in family Thuidiaceae |
| title_sort | chloroplast genome of the moss haplocladium microphyllum first in family thuidiaceae |
| topic | bryophytes thuidiaceae chloroplast next-generation sequencing |
| url | http://dx.doi.org/10.1080/23802359.2020.1789006 |
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