Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.

SH3 domains constitute a new type of ubiquitin-binding domains. We previously showed that the third SH3 domain (SH3-C) of CD2AP binds ubiquitin in an alternative orientation. We have determined the structure of the complex between first CD2AP SH3 domain and ubiquitin and performed a structural and m...

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Main Authors: Jose L Ortega Roldan, Salvador Casares, Malene Ringkjøbing Jensen, Nayra Cárdenes, Jerónimo Bravo, Martin Blackledge, Ana I Azuaga, Nico A J van Nuland
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2013-01-01
Series:PLoS ONE
Online Access:https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24039852/?tool=EBI
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author Jose L Ortega Roldan
Salvador Casares
Malene Ringkjøbing Jensen
Nayra Cárdenes
Jerónimo Bravo
Martin Blackledge
Ana I Azuaga
Nico A J van Nuland
author_facet Jose L Ortega Roldan
Salvador Casares
Malene Ringkjøbing Jensen
Nayra Cárdenes
Jerónimo Bravo
Martin Blackledge
Ana I Azuaga
Nico A J van Nuland
author_sort Jose L Ortega Roldan
collection DOAJ
description SH3 domains constitute a new type of ubiquitin-binding domains. We previously showed that the third SH3 domain (SH3-C) of CD2AP binds ubiquitin in an alternative orientation. We have determined the structure of the complex between first CD2AP SH3 domain and ubiquitin and performed a structural and mutational analysis to decipher the determinants of the SH3-C binding mode to ubiquitin. We found that the Phe-to-Tyr mutation in CD2AP and in the homologous CIN85 SH3-C domain does not abrogate ubiquitin binding, in contrast to previous hypothesis and our findings for the first two CD2AP SH3 domains. The similar alternative binding mode of the SH3-C domains of these related adaptor proteins is characterised by a higher affinity to C-terminal extended ubiquitin molecules. We conclude that CD2AP/CIN85 SH3-C domain interaction with ubiquitin constitutes a new ubiquitin-binding mode involved in a different cellular function and thus changes the previously established mechanism of EGF-dependent CD2AP/CIN85 mono-ubiquitination.
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spelling doaj.art-f0dfce6381094a71b4f4d8cd64cd8eef2022-12-21T21:24:24ZengPublic Library of Science (PLoS)PLoS ONE1932-62032013-01-0189e7301810.1371/journal.pone.0073018Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.Jose L Ortega RoldanSalvador CasaresMalene Ringkjøbing JensenNayra CárdenesJerónimo BravoMartin BlackledgeAna I AzuagaNico A J van NulandSH3 domains constitute a new type of ubiquitin-binding domains. We previously showed that the third SH3 domain (SH3-C) of CD2AP binds ubiquitin in an alternative orientation. We have determined the structure of the complex between first CD2AP SH3 domain and ubiquitin and performed a structural and mutational analysis to decipher the determinants of the SH3-C binding mode to ubiquitin. We found that the Phe-to-Tyr mutation in CD2AP and in the homologous CIN85 SH3-C domain does not abrogate ubiquitin binding, in contrast to previous hypothesis and our findings for the first two CD2AP SH3 domains. The similar alternative binding mode of the SH3-C domains of these related adaptor proteins is characterised by a higher affinity to C-terminal extended ubiquitin molecules. We conclude that CD2AP/CIN85 SH3-C domain interaction with ubiquitin constitutes a new ubiquitin-binding mode involved in a different cellular function and thus changes the previously established mechanism of EGF-dependent CD2AP/CIN85 mono-ubiquitination.https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24039852/?tool=EBI
spellingShingle Jose L Ortega Roldan
Salvador Casares
Malene Ringkjøbing Jensen
Nayra Cárdenes
Jerónimo Bravo
Martin Blackledge
Ana I Azuaga
Nico A J van Nuland
Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.
PLoS ONE
title Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.
title_full Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.
title_fullStr Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.
title_full_unstemmed Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.
title_short Distinct ubiquitin binding modes exhibited by SH3 domains: molecular determinants and functional implications.
title_sort distinct ubiquitin binding modes exhibited by sh3 domains molecular determinants and functional implications
url https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24039852/?tool=EBI
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