DeephageTP: a convolutional neural network framework for identifying phage-specific proteins from metagenomic sequencing data

DeephageTP: a convolutional neural network framework for identifying phage-specific proteins from metagenomic sequencing data

Bacteriophages (phages) are the most abundant and diverse biological entity on Earth. Due to the lack of universal gene markers and database representatives, there about 50–90% of genes of phages are unable to assign functions. This makes it a challenge to identify phage genomes and annotate functio...

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Bibliographic Details
Main Authors: Yunmeng Chu, Shun Guo, Dachao Cui, Xiongfei Fu, Yingfei Ma
Format: Article
Language:English
Published: PeerJ Inc. 2022-06-01
Series:PeerJ
Subjects:
Convolutional neural network
Deep learning
Phage-specific protein
Phage
Metagenomics
Online Access:https://peerj.com/articles/13404.pdf

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