Processing Human Thymic Tissue for Single Cell RNA-Seq

Summary: Single cell RNA sequencing of human thymic cells is dependent on isolation of highly pure and viable cell populations. This protocol describes the isolation of CD34+ progenitor and more differentiated CD34– fractions from post-natal thymic tissue to study thymopoiesis. CD34+ cells represent...

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Bibliographic Details
Main Authors: Justin Le, Vi Luan Ha, Annie Luong, Chintan Parekh
Format: Article
Language:English
Published: Elsevier 2020-09-01
Series:STAR Protocols
Online Access:http://www.sciencedirect.com/science/article/pii/S2666166720300770
Description
Summary:Summary: Single cell RNA sequencing of human thymic cells is dependent on isolation of highly pure and viable cell populations. This protocol describes the isolation of CD34+ progenitor and more differentiated CD34– fractions from post-natal thymic tissue to study thymopoiesis. CD34+ cells represent <1% of thymic cells, so this protocol uses magnetic- followed by fluorescence-activated cell separation to isolate highly enriched CD34+ cells.For complete details on the use and execution of this protocol, please refer to Le et al. (2020).
ISSN:2666-1667