Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae)
Limnophila sessiliflora Blume 1826 is a perennial amphibious herb with ornamental and water purification value that is widespread in temperate and tropical Asia. In the present study, we sequenced, assembled, and annotated the complete chloroplast (cp) genome of L. sessiliflora. It is 152,395 bp in...
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| Format: | Article |
| Language: | English |
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Taylor & Francis Group
2023-05-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | http://dx.doi.org/10.1080/23802359.2023.2209390 |
| _version_ | 1797638542066712576 |
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| author | Hongjin Dong Ruixuan Huang Shuzhen Wang Jiaojun Yu |
| author_facet | Hongjin Dong Ruixuan Huang Shuzhen Wang Jiaojun Yu |
| author_sort | Hongjin Dong |
| collection | DOAJ |
| description | Limnophila sessiliflora Blume 1826 is a perennial amphibious herb with ornamental and water purification value that is widespread in temperate and tropical Asia. In the present study, we sequenced, assembled, and annotated the complete chloroplast (cp) genome of L. sessiliflora. It is 152,395 bp in length, with a typical quadripartite structure, comprising a pair of inverted repeat regions (IRs; 25,545 bp), a large single-copy region (LSC; 83,163 bp), and a small single-copy (SSC; 18,142 bp) region. The whole cp genome contained 135 genes, including 89 protein-coding genes (PCGs), 38 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The maximum-likelihood (ML) phylogenetic analysis indicated that L. sessiliflora was closely related to the genera Bacopa and Scoparia in the tribe Gratioleae of Plantaginaceae. This cp genome provides a valuable genetic resource for phylogenetic study. |
| first_indexed | 2024-03-11T13:03:56Z |
| format | Article |
| id | doaj.art-f1e986f56fc448d9b30001ffa4968dad |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:03:56Z |
| publishDate | 2023-05-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f1e986f56fc448d9b30001ffa4968dad2023-11-03T14:44:07ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592023-05-018558558810.1080/23802359.2023.22093902209390Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae)Hongjin Dong0Ruixuan Huang1Shuzhen Wang2Jiaojun Yu3Hubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal UniversityHubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal UniversityHubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal UniversityHubei Key Laboratory of Economic Forest Germplasm Improvement and Resources Comprehensive Utilization, Huanggang Normal UniversityLimnophila sessiliflora Blume 1826 is a perennial amphibious herb with ornamental and water purification value that is widespread in temperate and tropical Asia. In the present study, we sequenced, assembled, and annotated the complete chloroplast (cp) genome of L. sessiliflora. It is 152,395 bp in length, with a typical quadripartite structure, comprising a pair of inverted repeat regions (IRs; 25,545 bp), a large single-copy region (LSC; 83,163 bp), and a small single-copy (SSC; 18,142 bp) region. The whole cp genome contained 135 genes, including 89 protein-coding genes (PCGs), 38 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The maximum-likelihood (ML) phylogenetic analysis indicated that L. sessiliflora was closely related to the genera Bacopa and Scoparia in the tribe Gratioleae of Plantaginaceae. This cp genome provides a valuable genetic resource for phylogenetic study.http://dx.doi.org/10.1080/23802359.2023.2209390chloroplast genomelimnophila sessilifloraphylogenyplantaginaceae |
| spellingShingle | Hongjin Dong Ruixuan Huang Shuzhen Wang Jiaojun Yu Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae) Mitochondrial DNA. Part B. Resources chloroplast genome limnophila sessiliflora phylogeny plantaginaceae |
| title | Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae) |
| title_full | Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae) |
| title_fullStr | Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae) |
| title_full_unstemmed | Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae) |
| title_short | Characterization of the complete chloroplast genome sequence of Limnophila sessiliflora Blume 1826 (Plantaginaceae) |
| title_sort | characterization of the complete chloroplast genome sequence of limnophila sessiliflora blume 1826 plantaginaceae |
| topic | chloroplast genome limnophila sessiliflora phylogeny plantaginaceae |
| url | http://dx.doi.org/10.1080/23802359.2023.2209390 |
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