A graph-based approach for the visualisation and analysis of bacterial pangenomes

A graph-based approach for the visualisation and analysis of bacterial pangenomes

Abstract Background The advent of low cost, high throughput DNA sequencing has led to the availability of thousands of complete genome sequences for a wide variety of bacterial species. Examining and interpreting genetic variation on this scale represents a significant challenge to existing methods...

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Bibliographic Details
Main Authors: Joshua D. Harling-Lee, Jamie Gorzynski, Gonzalo Yebra, Tim Angus, J. Ross Fitzgerald, Tom C. Freeman
Format: Article
Language:English
Published: BMC 2022-10-01
Series:BMC Bioinformatics
Subjects:
Bacteria
Pangenome
Accessory genes
Network graphs
Data visualisation
Online Access:https://doi.org/10.1186/s12859-022-04898-2

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