The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae)
In this study, the complete mitogenome sequence of Montipora digitata (Cnidarian: Acroporidae) has been decoded for the first time using the low-coverage whole-genome sequencing method. The overall base composition of M. digitata mitogenome for A, C, G, and T is 24.9%, 14.2%, 24.2%, and 36.8%, respe...
| Main Authors: | , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2018-07-01
|
| Series: | Mitochondrial DNA. Part B. Resources |
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2018.1450656 |
| _version_ | 1797640726466527232 |
|---|---|
| author | Xinming Liu Chenying Wang Xiaofeng Shi Xinqing Zheng |
| author_facet | Xinming Liu Chenying Wang Xiaofeng Shi Xinqing Zheng |
| author_sort | Xinming Liu |
| collection | DOAJ |
| description | In this study, the complete mitogenome sequence of Montipora digitata (Cnidarian: Acroporidae) has been decoded for the first time using the low-coverage whole-genome sequencing method. The overall base composition of M. digitata mitogenome for A, C, G, and T is 24.9%, 14.2%, 24.2%, and 36.8%, respectively, with a GC content of 38.3%. The assembled mitogenome consists of 17,884 bp with unique 13 unique protein-coding genes (PCGs), two ribosomal RNAs, and only three transfer RNAs genes. M. digitata has one big intron insertion in the ND5 gene. The complete M. digitata mitogenome provides essential and important molecular DNA data for further phylogenetic and evolutionary stony coral analysis. |
| first_indexed | 2024-03-11T13:35:54Z |
| format | Article |
| id | doaj.art-f2d075b895e94c9ba2044c56d0568954 |
| institution | Directory Open Access Journal |
| issn | 2380-2359 |
| language | English |
| last_indexed | 2024-03-11T13:35:54Z |
| publishDate | 2018-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj.art-f2d075b895e94c9ba2044c56d05689542023-11-02T15:57:22ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-07-013279479510.1080/23802359.2018.14506561450656The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae)Xinming Liu0Chenying Wang1Xiaofeng Shi2Xinqing Zheng3Third Institute of Oceanography, State Oceanic AdministrationThird Institute of Oceanography, State Oceanic AdministrationThird Institute of Oceanography, State Oceanic AdministrationThird Institute of Oceanography, State Oceanic AdministrationIn this study, the complete mitogenome sequence of Montipora digitata (Cnidarian: Acroporidae) has been decoded for the first time using the low-coverage whole-genome sequencing method. The overall base composition of M. digitata mitogenome for A, C, G, and T is 24.9%, 14.2%, 24.2%, and 36.8%, respectively, with a GC content of 38.3%. The assembled mitogenome consists of 17,884 bp with unique 13 unique protein-coding genes (PCGs), two ribosomal RNAs, and only three transfer RNAs genes. M. digitata has one big intron insertion in the ND5 gene. The complete M. digitata mitogenome provides essential and important molecular DNA data for further phylogenetic and evolutionary stony coral analysis.http://dx.doi.org/10.1080/23802359.2018.1450656montipora digitatamitogenomenext generation sequencing |
| spellingShingle | Xinming Liu Chenying Wang Xiaofeng Shi Xinqing Zheng The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae) Mitochondrial DNA. Part B. Resources montipora digitata mitogenome next generation sequencing |
| title | The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae) |
| title_full | The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae) |
| title_fullStr | The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae) |
| title_full_unstemmed | The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae) |
| title_short | The complete mitogenome of Montipora digitata (Cnidarian: Acroporidae) |
| title_sort | complete mitogenome of montipora digitata cnidarian acroporidae |
| topic | montipora digitata mitogenome next generation sequencing |
| url | http://dx.doi.org/10.1080/23802359.2018.1450656 |
| work_keys_str_mv | AT xinmingliu thecompletemitogenomeofmontiporadigitatacnidarianacroporidae AT chenyingwang thecompletemitogenomeofmontiporadigitatacnidarianacroporidae AT xiaofengshi thecompletemitogenomeofmontiporadigitatacnidarianacroporidae AT xinqingzheng thecompletemitogenomeofmontiporadigitatacnidarianacroporidae AT xinmingliu completemitogenomeofmontiporadigitatacnidarianacroporidae AT chenyingwang completemitogenomeofmontiporadigitatacnidarianacroporidae AT xiaofengshi completemitogenomeofmontiporadigitatacnidarianacroporidae AT xinqingzheng completemitogenomeofmontiporadigitatacnidarianacroporidae |