Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma

Abstract Glioma is a unique neoplastic disease that develops exclusively in the central nervous system (CNS) and rarely metastasizes to other tissues. This feature strongly implicates the tumor-host CNS microenvironment in gliomagenesis and tumor progression. We investigated the differences and simi...

Full description

Bibliographic Details
Main Authors: Nina P. Connolly, Amol C. Shetty, Jesse A. Stokum, Ina Hoeschele, Marni B. Siegel, C. Ryan Miller, Anthony J. Kim, Cheng-Ying Ho, Eduardo Davila, J. Marc Simard, Scott E. Devine, John H. Rossmeisl, Eric C. Holland, Jeffrey A. Winkles, Graeme F. Woodworth
Format: Article
Language:English
Published: Nature Portfolio 2018-01-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-018-19451-6
_version_ 1818345602161836032
author Nina P. Connolly
Amol C. Shetty
Jesse A. Stokum
Ina Hoeschele
Marni B. Siegel
C. Ryan Miller
Anthony J. Kim
Cheng-Ying Ho
Eduardo Davila
J. Marc Simard
Scott E. Devine
John H. Rossmeisl
Eric C. Holland
Jeffrey A. Winkles
Graeme F. Woodworth
author_facet Nina P. Connolly
Amol C. Shetty
Jesse A. Stokum
Ina Hoeschele
Marni B. Siegel
C. Ryan Miller
Anthony J. Kim
Cheng-Ying Ho
Eduardo Davila
J. Marc Simard
Scott E. Devine
John H. Rossmeisl
Eric C. Holland
Jeffrey A. Winkles
Graeme F. Woodworth
author_sort Nina P. Connolly
collection DOAJ
description Abstract Glioma is a unique neoplastic disease that develops exclusively in the central nervous system (CNS) and rarely metastasizes to other tissues. This feature strongly implicates the tumor-host CNS microenvironment in gliomagenesis and tumor progression. We investigated the differences and similarities in glioma biology as conveyed by transcriptomic patterns across four mammalian hosts: rats, mice, dogs, and humans. Given the inherent intra-tumoral molecular heterogeneity of human glioma, we focused this study on tumors with upregulation of the platelet-derived growth factor signaling axis, a common and early alteration in human gliomagenesis. The results reveal core neoplastic alterations in mammalian glioma, as well as unique contributions of the tumor host to neoplastic processes. Notable differences were observed in gene expression patterns as well as related biological pathways and cell populations known to mediate key elements of glioma biology, including angiogenesis, immune evasion, and brain invasion. These data provide new insights regarding mammalian models of human glioma, and how these insights and models relate to our current understanding of the human disease.
first_indexed 2024-12-13T17:04:59Z
format Article
id doaj.art-f2d89c7796d7442691323a555b449266
institution Directory Open Access Journal
issn 2045-2322
language English
last_indexed 2024-12-13T17:04:59Z
publishDate 2018-01-01
publisher Nature Portfolio
record_format Article
series Scientific Reports
spelling doaj.art-f2d89c7796d7442691323a555b4492662022-12-21T23:37:42ZengNature PortfolioScientific Reports2045-23222018-01-018111510.1038/s41598-018-19451-6Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian gliomaNina P. Connolly0Amol C. Shetty1Jesse A. Stokum2Ina Hoeschele3Marni B. Siegel4C. Ryan Miller5Anthony J. Kim6Cheng-Ying Ho7Eduardo Davila8J. Marc Simard9Scott E. Devine10John H. Rossmeisl11Eric C. Holland12Jeffrey A. Winkles13Graeme F. Woodworth14Department of Neurosurgery, University of Maryland School of MedicineInstitute for Genome Sciences, University of Maryland School of MedicineDepartment of Neurosurgery, University of Maryland School of MedicineVirginia Bioinformatics Institute and Department of Statistics, Virginia TechDepartments of Pathology and Laboratory Medicine, Neurology, and Pharmacology, Lineberger Comprehensive Cancer Center and Neuroscience Center, University of North CarolinaDepartments of Pathology and Laboratory Medicine, Neurology, and Pharmacology, Lineberger Comprehensive Cancer Center and Neuroscience Center, University of North CarolinaDepartment of Neurosurgery, University of Maryland School of MedicineDepartment of Pathology, University of Maryland School of MedicineMarlene and Stewart Greenebaum Comprehensive Cancer Center, University of Maryland School of MedicineDepartment of Neurosurgery, University of Maryland School of MedicineInstitute for Genome Sciences, University of Maryland School of MedicineDepartment of Small Animal Clinical Sciences, Virginia-Maryland College of Veterinary MedicineFred Hutchinson Cancer Research Center, University of WashingtonMarlene and Stewart Greenebaum Comprehensive Cancer Center, University of Maryland School of MedicineDepartment of Neurosurgery, University of Maryland School of MedicineAbstract Glioma is a unique neoplastic disease that develops exclusively in the central nervous system (CNS) and rarely metastasizes to other tissues. This feature strongly implicates the tumor-host CNS microenvironment in gliomagenesis and tumor progression. We investigated the differences and similarities in glioma biology as conveyed by transcriptomic patterns across four mammalian hosts: rats, mice, dogs, and humans. Given the inherent intra-tumoral molecular heterogeneity of human glioma, we focused this study on tumors with upregulation of the platelet-derived growth factor signaling axis, a common and early alteration in human gliomagenesis. The results reveal core neoplastic alterations in mammalian glioma, as well as unique contributions of the tumor host to neoplastic processes. Notable differences were observed in gene expression patterns as well as related biological pathways and cell populations known to mediate key elements of glioma biology, including angiogenesis, immune evasion, and brain invasion. These data provide new insights regarding mammalian models of human glioma, and how these insights and models relate to our current understanding of the human disease.https://doi.org/10.1038/s41598-018-19451-6
spellingShingle Nina P. Connolly
Amol C. Shetty
Jesse A. Stokum
Ina Hoeschele
Marni B. Siegel
C. Ryan Miller
Anthony J. Kim
Cheng-Ying Ho
Eduardo Davila
J. Marc Simard
Scott E. Devine
John H. Rossmeisl
Eric C. Holland
Jeffrey A. Winkles
Graeme F. Woodworth
Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma
Scientific Reports
title Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma
title_full Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma
title_fullStr Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma
title_full_unstemmed Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma
title_short Cross-species transcriptional analysis reveals conserved and host-specific neoplastic processes in mammalian glioma
title_sort cross species transcriptional analysis reveals conserved and host specific neoplastic processes in mammalian glioma
url https://doi.org/10.1038/s41598-018-19451-6
work_keys_str_mv AT ninapconnolly crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT amolcshetty crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT jesseastokum crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT inahoeschele crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT marnibsiegel crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT cryanmiller crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT anthonyjkim crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT chengyingho crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT eduardodavila crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT jmarcsimard crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT scottedevine crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT johnhrossmeisl crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT ericcholland crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT jeffreyawinkles crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma
AT graemefwoodworth crossspeciestranscriptionalanalysisrevealsconservedandhostspecificneoplasticprocessesinmammalianglioma